Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18575 and BWI76_RS18580 are separated by 4 nucleotides BWI76_RS18580 and BWI76_RS18585 are separated by 383 nucleotides BWI76_RS18585 and BWI76_RS18590 overlap by 1 nucleotides BWI76_RS18590 and BWI76_RS18595 are separated by 139 nucleotides
BWI76_RS18575: BWI76_RS18575 - transcriptional regulator, at 3,853,441 to 3,853,743
_RS18575
BWI76_RS18580: BWI76_RS18580 - hypothetical protein, at 3,853,748 to 3,854,101
_RS18580
BWI76_RS18585: BWI76_RS18585 - two-component sensor histidine kinase, at 3,854,485 to 3,855,903
_RS18585
BWI76_RS18590: BWI76_RS18590 - DNA-binding response regulator, at 3,855,903 to 3,856,571
_RS18590
BWI76_RS18595: BWI76_RS18595 - hypothetical protein, at 3,856,711 to 3,857,337
_RS18595
Position (kb)
3854
3855
3856 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3853.515 kb on - strand, within BWI76_RS18575 at 3853.655 kb on - strand, within BWI76_RS18575 at 3853.776 kb on - strand at 3853.805 kb on + strand, within BWI76_RS18580 at 3854.056 kb on + strand, within BWI76_RS18580 at 3854.308 kb on - strand at 3854.358 kb on + strand at 3854.490 kb on - strand at 3854.619 kb on + strand at 3854.831 kb on + strand, within BWI76_RS18585 at 3854.831 kb on + strand, within BWI76_RS18585 at 3854.839 kb on - strand, within BWI76_RS18585 at 3854.839 kb on - strand, within BWI76_RS18585 at 3854.850 kb on - strand, within BWI76_RS18585 at 3854.925 kb on - strand, within BWI76_RS18585 at 3854.934 kb on + strand, within BWI76_RS18585 at 3854.952 kb on - strand, within BWI76_RS18585 at 3855.054 kb on + strand, within BWI76_RS18585 at 3855.083 kb on + strand, within BWI76_RS18585 at 3855.337 kb on - strand, within BWI76_RS18585 at 3855.490 kb on + strand, within BWI76_RS18585 at 3855.499 kb on + strand, within BWI76_RS18585 at 3855.516 kb on - strand at 3855.758 kb on - strand, within BWI76_RS18585 at 3855.948 kb on - strand at 3856.161 kb on - strand, within BWI76_RS18590 at 3856.271 kb on - strand, within BWI76_RS18590 at 3856.325 kb on - strand, within BWI76_RS18590 at 3856.412 kb on + strand, within BWI76_RS18590 at 3856.420 kb on - strand, within BWI76_RS18590 at 3856.516 kb on - strand at 3856.517 kb on - strand at 3856.608 kb on - strand at 3856.655 kb on + strand at 3856.663 kb on - strand at 3856.663 kb on - strand at 3856.778 kb on - strand, within BWI76_RS18595 at 3856.823 kb on - strand, within BWI76_RS18595
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 3,853,515 - BWI76_RS18575 0.24 +0.3 3,853,655 - BWI76_RS18575 0.71 +0.1 3,853,776 - -0.5 3,853,805 + BWI76_RS18580 0.16 +0.6 3,854,056 + BWI76_RS18580 0.87 +1.1 3,854,308 - -0.1 3,854,358 + +0.4 3,854,490 - +0.2 3,854,619 + -0.3 3,854,831 + BWI76_RS18585 0.24 +1.8 3,854,831 + BWI76_RS18585 0.24 +0.7 3,854,839 - BWI76_RS18585 0.25 +0.2 3,854,839 - BWI76_RS18585 0.25 +1.0 3,854,850 - BWI76_RS18585 0.26 +2.5 3,854,925 - BWI76_RS18585 0.31 -0.1 3,854,934 + BWI76_RS18585 0.32 +0.8 3,854,952 - BWI76_RS18585 0.33 +1.5 3,855,054 + BWI76_RS18585 0.40 -0.4 3,855,083 + BWI76_RS18585 0.42 -1.0 3,855,337 - BWI76_RS18585 0.60 -2.2 3,855,490 + BWI76_RS18585 0.71 +1.6 3,855,499 + BWI76_RS18585 0.71 +1.6 3,855,516 - +1.1 3,855,758 - BWI76_RS18585 0.90 -0.2 3,855,948 - -0.2 3,856,161 - BWI76_RS18590 0.39 -0.3 3,856,271 - BWI76_RS18590 0.55 -1.3 3,856,325 - BWI76_RS18590 0.63 -1.0 3,856,412 + BWI76_RS18590 0.76 -0.9 3,856,420 - BWI76_RS18590 0.77 +0.2 3,856,516 - +0.2 3,856,517 - -0.4 3,856,608 - +1.9 3,856,655 + -0.0 3,856,663 - -0.6 3,856,663 - -0.2 3,856,778 - BWI76_RS18595 0.11 -0.1 3,856,823 - BWI76_RS18595 0.18 +0.0
Or see this region's nucleotide sequence