Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17370 and BWI76_RS17375 are separated by 10 nucleotides BWI76_RS17375 and BWI76_RS17380 are separated by 1 nucleotides BWI76_RS17380 and BWI76_RS17385 are separated by 248 nucleotides
BWI76_RS17370: BWI76_RS17370 - nitrate transporter NasD, at 3,604,746 to 3,605,534
_RS17370
BWI76_RS17375: BWI76_RS17375 - nitrate ABC transporter, permease protein, at 3,605,545 to 3,606,429
_RS17375
BWI76_RS17380: BWI76_RS17380 - nitrate transporter component, at 3,606,431 to 3,607,687
_RS17380
BWI76_RS17385: BWI76_RS17385 - nitrate regulatory protein, at 3,607,936 to 3,609,126
_RS17385
Position (kb)
3606
3607
3608 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 3605.452 kb on - strand, within BWI76_RS17370 at 3605.877 kb on + strand, within BWI76_RS17375 at 3606.323 kb on - strand, within BWI76_RS17375 at 3606.793 kb on + strand, within BWI76_RS17380 at 3607.015 kb on + strand, within BWI76_RS17380 at 3607.519 kb on - strand, within BWI76_RS17380 at 3607.567 kb on - strand at 3607.690 kb on - strand at 3607.735 kb on - strand at 3607.747 kb on + strand at 3607.869 kb on + strand at 3607.973 kb on - strand at 3608.084 kb on + strand, within BWI76_RS17385 at 3608.152 kb on - strand, within BWI76_RS17385 at 3608.211 kb on + strand, within BWI76_RS17385 at 3608.219 kb on - strand, within BWI76_RS17385 at 3608.219 kb on - strand, within BWI76_RS17385 at 3608.221 kb on - strand, within BWI76_RS17385 at 3608.288 kb on + strand, within BWI76_RS17385
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 3,605,452 - BWI76_RS17370 0.89 +0.8 3,605,877 + BWI76_RS17375 0.38 -0.7 3,606,323 - BWI76_RS17375 0.88 +1.0 3,606,793 + BWI76_RS17380 0.29 +4.2 3,607,015 + BWI76_RS17380 0.46 +4.2 3,607,519 - BWI76_RS17380 0.87 +0.0 3,607,567 - -0.7 3,607,690 - -1.2 3,607,735 - +0.3 3,607,747 + +0.3 3,607,869 + -0.9 3,607,973 - -0.8 3,608,084 + BWI76_RS17385 0.12 -0.5 3,608,152 - BWI76_RS17385 0.18 +0.3 3,608,211 + BWI76_RS17385 0.23 +0.7 3,608,219 - BWI76_RS17385 0.24 -1.1 3,608,219 - BWI76_RS17385 0.24 -1.1 3,608,221 - BWI76_RS17385 0.24 +0.8 3,608,288 + BWI76_RS17385 0.30 -0.1
Or see this region's nucleotide sequence