Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17185

Experiment: Gly-Glu (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS17175 and BWI76_RS17180 are separated by 92 nucleotidesBWI76_RS17180 and BWI76_RS17185 are separated by 106 nucleotidesBWI76_RS17185 and BWI76_RS17190 are separated by 19 nucleotidesBWI76_RS17190 and BWI76_RS17195 are separated by 211 nucleotides BWI76_RS17175: BWI76_RS17175 - 6-phosphofructokinase II, at 3,560,009 to 3,560,941 _RS17175 BWI76_RS17180: BWI76_RS17180 - hypothetical protein, at 3,561,034 to 3,561,318 _RS17180 BWI76_RS17185: BWI76_RS17185 - fructosamine kinase family protein, at 3,561,425 to 3,562,297 _RS17185 BWI76_RS17190: BWI76_RS17190 - TonB system transport protein TonB, at 3,562,317 to 3,563,054 _RS17190 BWI76_RS17195: BWI76_RS17195 - hypothetical protein, at 3,563,266 to 3,563,562 _RS17195 Position (kb) 3561 3562 3563Strain fitness (log2 ratio) -1 0 1 2 3at 3560.934 kb on + strandat 3561.067 kb on + strand, within BWI76_RS17180at 3561.144 kb on - strand, within BWI76_RS17180at 3561.261 kb on + strand, within BWI76_RS17180at 3561.767 kb on + strand, within BWI76_RS17185at 3562.198 kb on + strand, within BWI76_RS17185at 3562.548 kb on + strand, within BWI76_RS17190at 3562.960 kb on - strand, within BWI76_RS17190at 3562.965 kb on - strand, within BWI76_RS17190

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-Glu (C)
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3,560,934 + +0.7
3,561,067 + BWI76_RS17180 0.12 +3.0
3,561,144 - BWI76_RS17180 0.39 -0.7
3,561,261 + BWI76_RS17180 0.80 -0.5
3,561,767 + BWI76_RS17185 0.39 -1.3
3,562,198 + BWI76_RS17185 0.89 +2.9
3,562,548 + BWI76_RS17190 0.31 -1.3
3,562,960 - BWI76_RS17190 0.87 +0.8
3,562,965 - BWI76_RS17190 0.88 -0.9

Or see this region's nucleotide sequence