Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14510

Experiment: Gly-Glu (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS14505 and BWI76_RS14510 are separated by 27 nucleotidesBWI76_RS14510 and BWI76_RS14515 overlap by 8 nucleotides BWI76_RS14505: BWI76_RS14505 - salicylate synthase Irp9, at 3,028,508 to 3,029,818 _RS14505 BWI76_RS14510: BWI76_RS14510 - MFS transporter, at 3,029,846 to 3,031,126 _RS14510 BWI76_RS14515: BWI76_RS14515 - yersiniabactin-iron ABC transporter permease ATP-binding protein YbtQ, at 3,031,119 to 3,032,921 _RS14515 Position (kb) 3029 3030 3031 3032Strain fitness (log2 ratio) -1 0 1at 3028.983 kb on - strand, within BWI76_RS14505at 3029.349 kb on - strand, within BWI76_RS14505at 3029.734 kb on - strandat 3030.343 kb on - strand, within BWI76_RS14510at 3030.519 kb on + strand, within BWI76_RS14510at 3030.530 kb on + strand, within BWI76_RS14510at 3030.653 kb on + strand, within BWI76_RS14510at 3030.661 kb on - strand, within BWI76_RS14510at 3030.934 kb on - strand, within BWI76_RS14510at 3031.050 kb on - strandat 3031.217 kb on - strandat 3031.242 kb on - strandat 3031.512 kb on + strand, within BWI76_RS14515at 3031.573 kb on - strand, within BWI76_RS14515at 3032.035 kb on + strand, within BWI76_RS14515

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Gly-Glu (C)
remove
3,028,983 - BWI76_RS14505 0.36 -0.7
3,029,349 - BWI76_RS14505 0.64 -0.2
3,029,734 - +0.4
3,030,343 - BWI76_RS14510 0.39 +0.3
3,030,519 + BWI76_RS14510 0.53 +1.3
3,030,530 + BWI76_RS14510 0.53 -0.4
3,030,653 + BWI76_RS14510 0.63 +0.9
3,030,661 - BWI76_RS14510 0.64 -0.4
3,030,934 - BWI76_RS14510 0.85 +0.5
3,031,050 - +0.5
3,031,217 - -1.2
3,031,242 - -1.4
3,031,512 + BWI76_RS14515 0.22 +0.6
3,031,573 - BWI76_RS14515 0.25 -0.5
3,032,035 + BWI76_RS14515 0.51 -0.1

Or see this region's nucleotide sequence