Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14100

Experiment: Gly-Glu (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14095 and BWI76_RS14100 are separated by 272 nucleotidesBWI76_RS14100 and BWI76_RS14105 are separated by 120 nucleotidesBWI76_RS14105 and BWI76_RS14110 are separated by 104 nucleotides BWI76_RS14095: BWI76_RS14095 - hypothetical protein, at 2,945,771 to 2,947,096 _RS14095 BWI76_RS14100: BWI76_RS14100 - diguanylate phosphodiesterase, at 2,947,369 to 2,948,907 _RS14100 BWI76_RS14105: BWI76_RS14105 - NADH:ubiquinone reductase (Na(+)-transporting) subunit E, at 2,949,028 to 2,949,639 _RS14105 BWI76_RS14110: BWI76_RS14110 - C-lysozyme inhibitor, at 2,949,744 to 2,950,187 _RS14110 Position (kb) 2947 2948 2949Strain fitness (log2 ratio) -1 0 1 2 3 4at 2946.465 kb on - strand, within BWI76_RS14095at 2946.465 kb on - strand, within BWI76_RS14095at 2946.503 kb on + strand, within BWI76_RS14095at 2946.550 kb on + strand, within BWI76_RS14095at 2946.606 kb on + strand, within BWI76_RS14095at 2946.663 kb on - strand, within BWI76_RS14095at 2946.747 kb on + strand, within BWI76_RS14095at 2946.824 kb on - strand, within BWI76_RS14095at 2946.829 kb on + strand, within BWI76_RS14095at 2946.835 kb on - strand, within BWI76_RS14095at 2947.072 kb on - strandat 2947.083 kb on - strandat 2947.129 kb on - strandat 2947.280 kb on + strandat 2947.288 kb on - strandat 2947.288 kb on - strandat 2947.367 kb on - strandat 2947.423 kb on + strandat 2947.444 kb on - strandat 2947.503 kb on + strandat 2947.514 kb on + strandat 2947.514 kb on + strandat 2947.514 kb on + strandat 2947.514 kb on + strandat 2947.522 kb on - strandat 2947.522 kb on - strandat 2947.522 kb on - strandat 2947.522 kb on - strandat 2947.548 kb on - strand, within BWI76_RS14100at 2947.564 kb on - strand, within BWI76_RS14100at 2947.569 kb on - strand, within BWI76_RS14100at 2947.603 kb on + strand, within BWI76_RS14100at 2947.973 kb on - strand, within BWI76_RS14100at 2947.995 kb on - strand, within BWI76_RS14100at 2948.068 kb on + strand, within BWI76_RS14100at 2948.147 kb on - strand, within BWI76_RS14100at 2948.166 kb on + strand, within BWI76_RS14100at 2948.227 kb on + strand, within BWI76_RS14100at 2948.235 kb on - strand, within BWI76_RS14100at 2948.237 kb on + strand, within BWI76_RS14100at 2948.340 kb on + strand, within BWI76_RS14100at 2948.348 kb on - strand, within BWI76_RS14100at 2948.461 kb on - strand, within BWI76_RS14100at 2948.486 kb on + strand, within BWI76_RS14100at 2948.498 kb on + strand, within BWI76_RS14100at 2948.545 kb on - strand, within BWI76_RS14100at 2948.556 kb on + strand, within BWI76_RS14100at 2948.611 kb on + strand, within BWI76_RS14100at 2948.611 kb on + strand, within BWI76_RS14100at 2948.756 kb on - strandat 2948.776 kb on + strandat 2948.804 kb on + strandat 2948.812 kb on - strandat 2948.821 kb on + strandat 2948.822 kb on - strandat 2948.828 kb on - strandat 2948.829 kb on - strandat 2948.879 kb on + strandat 2948.887 kb on - strandat 2948.902 kb on - strandat 2948.906 kb on + strandat 2948.959 kb on + strandat 2949.018 kb on + strandat 2949.021 kb on + strandat 2949.034 kb on - strandat 2949.035 kb on - strandat 2949.035 kb on - strandat 2949.040 kb on - strandat 2949.082 kb on + strandat 2949.125 kb on - strand, within BWI76_RS14105at 2949.175 kb on - strand, within BWI76_RS14105at 2949.186 kb on + strand, within BWI76_RS14105at 2949.271 kb on - strand, within BWI76_RS14105at 2949.318 kb on - strand, within BWI76_RS14105at 2949.443 kb on - strand, within BWI76_RS14105at 2949.489 kb on - strand, within BWI76_RS14105at 2949.850 kb on - strand, within BWI76_RS14110at 2949.850 kb on - strand, within BWI76_RS14110at 2949.850 kb on - strand, within BWI76_RS14110

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-Glu (C)
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2,946,465 - BWI76_RS14095 0.52 -1.0
2,946,465 - BWI76_RS14095 0.52 +0.3
2,946,503 + BWI76_RS14095 0.55 +0.3
2,946,550 + BWI76_RS14095 0.59 +1.0
2,946,606 + BWI76_RS14095 0.63 +1.1
2,946,663 - BWI76_RS14095 0.67 +0.2
2,946,747 + BWI76_RS14095 0.74 +1.3
2,946,824 - BWI76_RS14095 0.79 -1.2
2,946,829 + BWI76_RS14095 0.80 -1.7
2,946,835 - BWI76_RS14095 0.80 -0.2
2,947,072 - -1.0
2,947,083 - +0.6
2,947,129 - +4.4
2,947,280 + -0.7
2,947,288 - -0.6
2,947,288 - +0.1
2,947,367 - -0.7
2,947,423 + +0.7
2,947,444 - -0.1
2,947,503 + -0.2
2,947,514 + -0.2
2,947,514 + -0.4
2,947,514 + +0.4
2,947,514 + +1.5
2,947,522 - -0.6
2,947,522 - +0.3
2,947,522 - +2.1
2,947,522 - -0.2
2,947,548 - BWI76_RS14100 0.12 +2.0
2,947,564 - BWI76_RS14100 0.13 +0.4
2,947,569 - BWI76_RS14100 0.13 -0.5
2,947,603 + BWI76_RS14100 0.15 +0.5
2,947,973 - BWI76_RS14100 0.39 +0.5
2,947,995 - BWI76_RS14100 0.41 +1.5
2,948,068 + BWI76_RS14100 0.45 -0.6
2,948,147 - BWI76_RS14100 0.51 +0.1
2,948,166 + BWI76_RS14100 0.52 +0.2
2,948,227 + BWI76_RS14100 0.56 +3.7
2,948,235 - BWI76_RS14100 0.56 +0.4
2,948,237 + BWI76_RS14100 0.56 -1.4
2,948,340 + BWI76_RS14100 0.63 -0.1
2,948,348 - BWI76_RS14100 0.64 +0.3
2,948,461 - BWI76_RS14100 0.71 -0.3
2,948,486 + BWI76_RS14100 0.73 +1.1
2,948,498 + BWI76_RS14100 0.73 +0.3
2,948,545 - BWI76_RS14100 0.76 -0.5
2,948,556 + BWI76_RS14100 0.77 +0.0
2,948,611 + BWI76_RS14100 0.81 +0.6
2,948,611 + BWI76_RS14100 0.81 -1.0
2,948,756 - -0.6
2,948,776 + +0.1
2,948,804 + -1.4
2,948,812 - +0.9
2,948,821 + +0.3
2,948,822 - -0.1
2,948,828 - +1.1
2,948,829 - +1.0
2,948,879 + +0.7
2,948,887 - -1.0
2,948,902 - -0.7
2,948,906 + +0.5
2,948,959 + -0.1
2,949,018 + -1.1
2,949,021 + +0.8
2,949,034 - -0.8
2,949,035 - -1.3
2,949,035 - -0.4
2,949,040 - -0.5
2,949,082 + -0.7
2,949,125 - BWI76_RS14105 0.16 -0.0
2,949,175 - BWI76_RS14105 0.24 -1.6
2,949,186 + BWI76_RS14105 0.26 +1.5
2,949,271 - BWI76_RS14105 0.40 -0.4
2,949,318 - BWI76_RS14105 0.47 +0.7
2,949,443 - BWI76_RS14105 0.68 -0.1
2,949,489 - BWI76_RS14105 0.75 +0.8
2,949,850 - BWI76_RS14110 0.24 -0.5
2,949,850 - BWI76_RS14110 0.24 -0.3
2,949,850 - BWI76_RS14110 0.24 -1.4

Or see this region's nucleotide sequence