Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11375

Experiment: Gly-Glu (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11365 and BWI76_RS11370 are separated by 0 nucleotidesBWI76_RS11370 and BWI76_RS11375 overlap by 4 nucleotidesBWI76_RS11375 and BWI76_RS11380 overlap by 4 nucleotidesBWI76_RS11380 and BWI76_RS11385 are separated by 58 nucleotides BWI76_RS11365: BWI76_RS11365 - iron ABC transporter, at 2,395,381 to 2,396,148 _RS11365 BWI76_RS11370: BWI76_RS11370 - iron-dicitrate transporter subunit FecD, at 2,396,149 to 2,397,102 _RS11370 BWI76_RS11375: BWI76_RS11375 - iron-dicitrate transporter permease subunit, at 2,397,099 to 2,398,097 _RS11375 BWI76_RS11380: BWI76_RS11380 - iron-dicitrate transporter substrate-binding subunit, at 2,398,094 to 2,398,996 _RS11380 BWI76_RS11385: BWI76_RS11385 - TonB-dependent siderophore receptor, at 2,399,055 to 2,401,385 _RS11385 Position (kb) 2397 2398 2399Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2396.128 kb on - strandat 2396.177 kb on + strandat 2396.210 kb on + strandat 2396.870 kb on + strand, within BWI76_RS11370at 2397.009 kb on + strandat 2397.136 kb on + strandat 2397.144 kb on - strandat 2397.183 kb on + strandat 2397.191 kb on - strandat 2397.264 kb on + strand, within BWI76_RS11375at 2397.605 kb on - strand, within BWI76_RS11375at 2397.760 kb on + strand, within BWI76_RS11375at 2398.281 kb on + strand, within BWI76_RS11380at 2398.328 kb on - strand, within BWI76_RS11380at 2398.416 kb on - strand, within BWI76_RS11380at 2398.872 kb on - strand, within BWI76_RS11380at 2398.883 kb on - strand, within BWI76_RS11380at 2398.908 kb on - strandat 2398.958 kb on - strandat 2399.078 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-Glu (C)
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2,396,128 - +0.8
2,396,177 + -0.8
2,396,210 + +0.8
2,396,870 + BWI76_RS11370 0.76 -2.2
2,397,009 + -0.5
2,397,136 + -1.1
2,397,144 - -0.4
2,397,183 + +0.4
2,397,191 - -0.6
2,397,264 + BWI76_RS11375 0.17 +0.0
2,397,605 - BWI76_RS11375 0.51 +0.2
2,397,760 + BWI76_RS11375 0.66 +0.0
2,398,281 + BWI76_RS11380 0.21 +0.1
2,398,328 - BWI76_RS11380 0.26 +0.8
2,398,416 - BWI76_RS11380 0.36 -0.3
2,398,872 - BWI76_RS11380 0.86 +0.3
2,398,883 - BWI76_RS11380 0.87 -0.8
2,398,908 - -1.1
2,398,958 - -1.7
2,399,078 + +3.1

Or see this region's nucleotide sequence