Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08360 and BWI76_RS08365 are separated by 62 nucleotides BWI76_RS08365 and BWI76_RS08370 overlap by 4 nucleotides BWI76_RS08370 and BWI76_RS08375 are separated by 9 nucleotides BWI76_RS08375 and BWI76_RS08380 are separated by 15 nucleotides
BWI76_RS08360: BWI76_RS08360 - LamB/YcsF family protein, at 1,769,645 to 1,770,391
_RS08360
BWI76_RS08365: BWI76_RS08365 - membrane protein, at 1,770,454 to 1,771,179
_RS08365
BWI76_RS08370: BWI76_RS08370 - membrane protein, at 1,771,176 to 1,772,171
_RS08370
BWI76_RS08375: BWI76_RS08375 - pyroglutamyl-peptidase I, at 1,772,181 to 1,772,825
_RS08375
BWI76_RS08380: BWI76_RS08380 - endonuclease VIII, at 1,772,841 to 1,773,632
_RS08380
Position (kb) 1771
1772
1773 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 1770.217 kb on - strand, within BWI76_RS08360 at 1770.298 kb on + strand, within BWI76_RS08360 at 1770.711 kb on + strand, within BWI76_RS08365 at 1771.143 kb on + strand at 1771.145 kb on - strand at 1771.151 kb on - strand at 1771.234 kb on - strand at 1771.286 kb on + strand, within BWI76_RS08370 at 1771.330 kb on + strand, within BWI76_RS08370 at 1772.016 kb on + strand, within BWI76_RS08370 at 1772.108 kb on + strand at 1772.116 kb on + strand at 1772.627 kb on - strand, within BWI76_RS08375 at 1772.633 kb on + strand, within BWI76_RS08375 at 1772.904 kb on + strand at 1772.912 kb on - strand at 1773.069 kb on + strand, within BWI76_RS08380
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 1,770,217 - BWI76_RS08360 0.77 -0.7 1,770,298 + BWI76_RS08360 0.87 +2.4 1,770,711 + BWI76_RS08365 0.35 -1.8 1,771,143 + +4.6 1,771,145 - +0.0 1,771,151 - -0.1 1,771,234 - +1.3 1,771,286 + BWI76_RS08370 0.11 +2.6 1,771,330 + BWI76_RS08370 0.15 -0.3 1,772,016 + BWI76_RS08370 0.84 -0.7 1,772,108 + -0.3 1,772,116 + +0.4 1,772,627 - BWI76_RS08375 0.69 +2.9 1,772,633 + BWI76_RS08375 0.70 -0.1 1,772,904 + +0.3 1,772,912 - -0.3 1,773,069 + BWI76_RS08380 0.29 +0.9
Or see this region's nucleotide sequence