Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05600 and BWI76_RS05605 are separated by 1 nucleotides BWI76_RS05605 and BWI76_RS05610 overlap by 4 nucleotides
BWI76_RS05600: BWI76_RS05600 - capsular polysaccharide biosynthesis protein, at 1,172,920 to 1,175,007
_RS05600
BWI76_RS05605: BWI76_RS05605 - polysaccharide export protein, at 1,175,009 to 1,175,563
_RS05605
BWI76_RS05610: BWI76_RS05610 - capsular polysaccharide synthesis protein CpsB, at 1,175,560 to 1,176,846
_RS05610
Position (kb)
1175
1176 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1174.047 kb on - strand, within BWI76_RS05600 at 1174.047 kb on - strand, within BWI76_RS05600 at 1174.047 kb on - strand, within BWI76_RS05600 at 1174.084 kb on - strand, within BWI76_RS05600 at 1174.142 kb on - strand, within BWI76_RS05600 at 1174.142 kb on - strand, within BWI76_RS05600 at 1174.333 kb on - strand, within BWI76_RS05600 at 1174.644 kb on + strand, within BWI76_RS05600 at 1174.727 kb on - strand, within BWI76_RS05600 at 1174.807 kb on - strand at 1174.825 kb on - strand at 1174.858 kb on + strand at 1174.909 kb on - strand at 1174.913 kb on + strand at 1174.978 kb on - strand at 1175.050 kb on + strand at 1175.050 kb on + strand at 1175.114 kb on - strand, within BWI76_RS05605 at 1175.239 kb on + strand, within BWI76_RS05605 at 1175.268 kb on - strand, within BWI76_RS05605 at 1175.269 kb on + strand, within BWI76_RS05605 at 1175.272 kb on + strand, within BWI76_RS05605 at 1175.277 kb on - strand, within BWI76_RS05605 at 1175.280 kb on - strand, within BWI76_RS05605 at 1175.290 kb on + strand, within BWI76_RS05605 at 1175.317 kb on + strand, within BWI76_RS05605 at 1175.325 kb on - strand, within BWI76_RS05605 at 1175.352 kb on + strand, within BWI76_RS05605 at 1175.360 kb on - strand, within BWI76_RS05605 at 1175.404 kb on - strand, within BWI76_RS05605 at 1175.486 kb on + strand, within BWI76_RS05605 at 1175.499 kb on + strand, within BWI76_RS05605 at 1175.502 kb on - strand, within BWI76_RS05605 at 1175.600 kb on + strand at 1175.600 kb on + strand at 1175.603 kb on - strand at 1175.604 kb on + strand at 1175.608 kb on - strand at 1175.608 kb on - strand at 1175.608 kb on - strand at 1175.615 kb on + strand at 1175.618 kb on - strand at 1175.621 kb on + strand at 1175.621 kb on + strand at 1175.623 kb on - strand at 1175.629 kb on + strand at 1175.635 kb on + strand at 1175.637 kb on - strand at 1175.691 kb on - strand, within BWI76_RS05610 at 1175.738 kb on - strand, within BWI76_RS05610 at 1175.784 kb on - strand, within BWI76_RS05610 at 1175.794 kb on - strand, within BWI76_RS05610 at 1175.840 kb on + strand, within BWI76_RS05610 at 1175.840 kb on + strand, within BWI76_RS05610 at 1175.840 kb on + strand, within BWI76_RS05610 at 1175.840 kb on + strand, within BWI76_RS05610 at 1175.845 kb on + strand, within BWI76_RS05610 at 1175.848 kb on - strand, within BWI76_RS05610 at 1175.848 kb on - strand, within BWI76_RS05610 at 1175.848 kb on - strand, within BWI76_RS05610 at 1175.848 kb on - strand, within BWI76_RS05610 at 1175.850 kb on + strand, within BWI76_RS05610 at 1175.858 kb on - strand, within BWI76_RS05610 at 1175.859 kb on - strand, within BWI76_RS05610 at 1175.916 kb on + strand, within BWI76_RS05610 at 1175.936 kb on + strand, within BWI76_RS05610 at 1175.944 kb on - strand, within BWI76_RS05610 at 1176.023 kb on + strand, within BWI76_RS05610 at 1176.033 kb on + strand, within BWI76_RS05610 at 1176.096 kb on - strand at 1176.137 kb on - strand, within BWI76_RS05610 at 1176.144 kb on + strand, within BWI76_RS05610 at 1176.144 kb on + strand, within BWI76_RS05610 at 1176.156 kb on + strand, within BWI76_RS05610 at 1176.267 kb on + strand, within BWI76_RS05610 at 1176.361 kb on - strand, within BWI76_RS05610
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 1,174,047 - BWI76_RS05600 0.54 -0.2 1,174,047 - BWI76_RS05600 0.54 -1.0 1,174,047 - BWI76_RS05600 0.54 -0.7 1,174,084 - BWI76_RS05600 0.56 +0.9 1,174,142 - BWI76_RS05600 0.59 +0.4 1,174,142 - BWI76_RS05600 0.59 -0.2 1,174,333 - BWI76_RS05600 0.68 -1.5 1,174,644 + BWI76_RS05600 0.83 -0.7 1,174,727 - BWI76_RS05600 0.87 -1.9 1,174,807 - +3.2 1,174,825 - +0.3 1,174,858 + -0.5 1,174,909 - +1.8 1,174,913 + -0.3 1,174,978 - +0.5 1,175,050 + -0.6 1,175,050 + +0.1 1,175,114 - BWI76_RS05605 0.19 -0.1 1,175,239 + BWI76_RS05605 0.41 -1.2 1,175,268 - BWI76_RS05605 0.47 -0.1 1,175,269 + BWI76_RS05605 0.47 -0.7 1,175,272 + BWI76_RS05605 0.47 -0.5 1,175,277 - BWI76_RS05605 0.48 -0.3 1,175,280 - BWI76_RS05605 0.49 -0.0 1,175,290 + BWI76_RS05605 0.51 +0.4 1,175,317 + BWI76_RS05605 0.55 +0.4 1,175,325 - BWI76_RS05605 0.57 -0.5 1,175,352 + BWI76_RS05605 0.62 -1.0 1,175,360 - BWI76_RS05605 0.63 +0.2 1,175,404 - BWI76_RS05605 0.71 -0.3 1,175,486 + BWI76_RS05605 0.86 -0.8 1,175,499 + BWI76_RS05605 0.88 +0.3 1,175,502 - BWI76_RS05605 0.89 +1.7 1,175,600 + -0.1 1,175,600 + +0.0 1,175,603 - +1.4 1,175,604 + +1.0 1,175,608 - +0.6 1,175,608 - +0.0 1,175,608 - +0.5 1,175,615 + +1.4 1,175,618 - -0.1 1,175,621 + +2.0 1,175,621 + +3.5 1,175,623 - +1.0 1,175,629 + -1.0 1,175,635 + -0.5 1,175,637 - +0.1 1,175,691 - BWI76_RS05610 0.10 -1.0 1,175,738 - BWI76_RS05610 0.14 +0.2 1,175,784 - BWI76_RS05610 0.17 +5.4 1,175,794 - BWI76_RS05610 0.18 -0.2 1,175,840 + BWI76_RS05610 0.22 -0.3 1,175,840 + BWI76_RS05610 0.22 +1.7 1,175,840 + BWI76_RS05610 0.22 +1.4 1,175,840 + BWI76_RS05610 0.22 +1.4 1,175,845 + BWI76_RS05610 0.22 -2.2 1,175,848 - BWI76_RS05610 0.22 +4.8 1,175,848 - BWI76_RS05610 0.22 -0.2 1,175,848 - BWI76_RS05610 0.22 -0.2 1,175,848 - BWI76_RS05610 0.22 -0.0 1,175,850 + BWI76_RS05610 0.23 -2.3 1,175,858 - BWI76_RS05610 0.23 -0.2 1,175,859 - BWI76_RS05610 0.23 +0.4 1,175,916 + BWI76_RS05610 0.28 -0.2 1,175,936 + BWI76_RS05610 0.29 +0.4 1,175,944 - BWI76_RS05610 0.30 -0.9 1,176,023 + BWI76_RS05610 0.36 +0.3 1,176,033 + BWI76_RS05610 0.37 -2.4 1,176,096 - +1.4 1,176,137 - BWI76_RS05610 0.45 -1.0 1,176,144 + BWI76_RS05610 0.45 -0.9 1,176,144 + BWI76_RS05610 0.45 +0.4 1,176,156 + BWI76_RS05610 0.46 -0.1 1,176,267 + BWI76_RS05610 0.55 +0.5 1,176,361 - BWI76_RS05610 0.62 +0.7
Or see this region's nucleotide sequence