Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00260

Experiment: Gly-Glu (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS00255 and BWI76_RS00260 overlap by 4 nucleotidesBWI76_RS00260 and BWI76_RS00265 are separated by 218 nucleotides BWI76_RS00255: BWI76_RS00255 - hypothetical protein, at 51,095 to 52,543 _RS00255 BWI76_RS00260: BWI76_RS00260 - ATPase RavA, at 52,540 to 54,039 _RS00260 BWI76_RS00265: BWI76_RS00265 - potassium transporter Kup, at 54,258 to 56,126 _RS00265 Position (kb) 52 53 54 55Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 51.543 kb on - strand, within BWI76_RS00255at 51.672 kb on + strand, within BWI76_RS00255at 51.786 kb on - strand, within BWI76_RS00255at 51.893 kb on - strand, within BWI76_RS00255at 51.912 kb on + strand, within BWI76_RS00255at 52.043 kb on - strand, within BWI76_RS00255at 52.043 kb on - strand, within BWI76_RS00255at 52.054 kb on + strand, within BWI76_RS00255at 52.064 kb on + strand, within BWI76_RS00255at 52.114 kb on + strand, within BWI76_RS00255at 52.183 kb on + strand, within BWI76_RS00255at 52.191 kb on - strand, within BWI76_RS00255at 52.191 kb on - strand, within BWI76_RS00255at 52.199 kb on - strand, within BWI76_RS00255at 52.389 kb on - strand, within BWI76_RS00255at 52.504 kb on - strandat 52.599 kb on + strandat 52.778 kb on + strand, within BWI76_RS00260at 52.782 kb on + strand, within BWI76_RS00260at 52.782 kb on + strand, within BWI76_RS00260at 52.867 kb on - strand, within BWI76_RS00260at 53.097 kb on - strand, within BWI76_RS00260at 53.099 kb on - strand, within BWI76_RS00260at 53.149 kb on - strand, within BWI76_RS00260at 53.149 kb on - strand, within BWI76_RS00260at 53.257 kb on - strand, within BWI76_RS00260at 53.362 kb on + strand, within BWI76_RS00260at 53.417 kb on - strand, within BWI76_RS00260at 53.417 kb on - strand, within BWI76_RS00260at 53.441 kb on + strand, within BWI76_RS00260at 53.457 kb on - strand, within BWI76_RS00260at 53.671 kb on - strand, within BWI76_RS00260at 53.687 kb on + strand, within BWI76_RS00260at 53.855 kb on - strand, within BWI76_RS00260at 53.951 kb on - strandat 53.951 kb on - strandat 53.951 kb on - strandat 53.993 kb on + strandat 54.028 kb on + strandat 54.089 kb on - strandat 54.093 kb on + strandat 54.142 kb on + strandat 54.142 kb on + strandat 54.142 kb on + strandat 54.150 kb on - strandat 54.163 kb on + strandat 54.184 kb on + strandat 54.342 kb on + strandat 54.344 kb on + strandat 54.351 kb on - strandat 54.351 kb on - strandat 54.392 kb on + strandat 54.506 kb on - strand, within BWI76_RS00265at 54.568 kb on + strand, within BWI76_RS00265at 54.568 kb on + strand, within BWI76_RS00265at 54.576 kb on - strandat 54.618 kb on + strand, within BWI76_RS00265at 54.687 kb on - strand, within BWI76_RS00265at 54.803 kb on + strand, within BWI76_RS00265at 54.838 kb on - strand, within BWI76_RS00265at 54.854 kb on - strand, within BWI76_RS00265at 54.924 kb on - strand, within BWI76_RS00265at 55.033 kb on + strand, within BWI76_RS00265at 55.033 kb on + strand, within BWI76_RS00265

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-Glu (C)
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51,543 - BWI76_RS00255 0.31 -2.8
51,672 + BWI76_RS00255 0.40 -1.4
51,786 - BWI76_RS00255 0.48 -1.0
51,893 - BWI76_RS00255 0.55 -0.0
51,912 + BWI76_RS00255 0.56 -0.3
52,043 - BWI76_RS00255 0.65 -0.7
52,043 - BWI76_RS00255 0.65 +0.5
52,054 + BWI76_RS00255 0.66 -1.6
52,064 + BWI76_RS00255 0.67 -0.5
52,114 + BWI76_RS00255 0.70 +0.2
52,183 + BWI76_RS00255 0.75 -1.5
52,191 - BWI76_RS00255 0.76 -0.2
52,191 - BWI76_RS00255 0.76 -0.8
52,199 - BWI76_RS00255 0.76 -1.6
52,389 - BWI76_RS00255 0.89 -1.3
52,504 - -1.5
52,599 + -0.5
52,778 + BWI76_RS00260 0.16 -1.7
52,782 + BWI76_RS00260 0.16 +1.3
52,782 + BWI76_RS00260 0.16 -0.5
52,867 - BWI76_RS00260 0.22 +0.5
53,097 - BWI76_RS00260 0.37 +1.5
53,099 - BWI76_RS00260 0.37 +0.3
53,149 - BWI76_RS00260 0.41 +0.3
53,149 - BWI76_RS00260 0.41 +0.1
53,257 - BWI76_RS00260 0.48 -0.6
53,362 + BWI76_RS00260 0.55 -0.6
53,417 - BWI76_RS00260 0.58 -1.8
53,417 - BWI76_RS00260 0.58 -1.8
53,441 + BWI76_RS00260 0.60 -0.1
53,457 - BWI76_RS00260 0.61 -1.8
53,671 - BWI76_RS00260 0.75 -2.6
53,687 + BWI76_RS00260 0.76 -2.9
53,855 - BWI76_RS00260 0.88 -0.9
53,951 - -1.4
53,951 - -1.1
53,951 - -1.6
53,993 + -1.6
54,028 + +1.1
54,089 - +2.0
54,093 + -0.0
54,142 + -0.5
54,142 + -0.3
54,142 + +0.9
54,150 - -0.7
54,163 + -0.3
54,184 + +1.3
54,342 + -0.7
54,344 + +1.3
54,351 - +0.5
54,351 - +0.7
54,392 + +0.7
54,506 - BWI76_RS00265 0.13 +1.4
54,568 + BWI76_RS00265 0.17 -0.8
54,568 + BWI76_RS00265 0.17 +1.9
54,576 - +2.1
54,618 + BWI76_RS00265 0.19 +1.8
54,687 - BWI76_RS00265 0.23 +1.2
54,803 + BWI76_RS00265 0.29 +1.7
54,838 - BWI76_RS00265 0.31 +1.1
54,854 - BWI76_RS00265 0.32 +3.6
54,924 - BWI76_RS00265 0.36 +1.2
55,033 + BWI76_RS00265 0.41 +1.3
55,033 + BWI76_RS00265 0.41 +1.8

Or see this region's nucleotide sequence