Strain Fitness in Shewanella loihica PV-4 around Shew_3744

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
4,456,796	-		Shew_3742	0.58	+0.1
4,456,929	+				-0.5
4,456,942	+				-0.2
4,456,998	+				+0.5
4,457,079	-				-0.0
4,457,085	+				+0.9
4,457,241	+		Shew_3743	0.17	+0.7
4,457,382	+		Shew_3743	0.42	-0.4
4,457,536	-		Shew_3743	0.69	+0.1
4,457,791	+				-0.4
4,457,822	+				+0.0
4,457,906	-				+0.1
4,457,917	-				+0.3
4,457,919	+				-0.5
4,457,927	-				+0.3
4,457,963	+				+1.7
4,458,110	-		Shew_3744	0.13	-0.7
4,458,164	-		Shew_3744	0.15	-0.2
4,458,393	-		Shew_3744	0.23	-0.7
4,458,470	+		Shew_3744	0.26	-0.4
4,458,675	+		Shew_3744	0.33	-1.0
4,458,685	+		Shew_3744	0.33	+0.4
4,458,817	-		Shew_3744	0.38	-1.1
4,458,884	-		Shew_3744	0.40	-1.0
4,458,948	-		Shew_3744	0.42	-0.8
4,459,039	-		Shew_3744	0.45	-0.8
4,459,226	+		Shew_3744	0.52	-0.7
4,459,239	-		Shew_3744	0.52	-0.6
4,459,362	-		Shew_3744	0.57	-0.8
4,459,412	+		Shew_3744	0.59	-0.8
4,459,569	+		Shew_3744	0.64	-0.4
4,459,569	+		Shew_3744	0.64	-0.5
4,459,569	+		Shew_3744	0.64	-0.2
4,460,380	-				-0.7
4,460,527	-				-1.8
4,460,576	+				-0.5
4,460,576	+				-0.7
4,460,584	-				+0.1
4,460,655	+				-0.8
4,460,655	+				-0.8
4,460,655	+				-0.5
4,460,655	+				-0.6
4,460,655	+				-0.6
4,460,655	+				+0.1
4,460,655	+				-0.5
4,460,655	+				-0.3
4,460,655	+				+0.1
4,460,655	+				-0.6
4,460,655	+				-1.2
4,460,655	+				-0.5
4,460,655	+				+0.2
4,460,655	+				-0.1
4,460,655	+				-1.3
4,460,663	-				+1.3
4,460,663	-				+1.2
4,460,663	-				-0.1
4,460,663	-				+1.5
4,460,663	-				+1.7
4,460,663	-				+1.1
4,460,663	-				+1.0
4,460,991	+				-0.1
4,460,999	-				+0.6
4,461,311	-		Shew_3745	0.15	+0.2
4,461,318	+		Shew_3745	0.15	-0.0