Strain Fitness in Shewanella loihica PV-4 around Shew_3554

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
4,243,612	+		Shew_3553	0.72	+2.3
4,243,752	+		Shew_3553	0.80	+2.3
4,243,846	-		Shew_3553	0.85	+0.8
4,244,027	+				+1.4
4,244,126	+				+1.8
4,244,134	-				+1.5
4,244,242	+				+0.2
4,244,250	-				+0.3
4,244,282	-				-2.2
4,244,412	+				+5.0
4,244,420	-				+4.6
4,244,469	-				+4.0
4,244,566	+				+4.0
4,244,576	+				+4.2
4,244,987	+	glnA	Shew_3554	0.35	+4.1
4,244,997	+	glnA	Shew_3554	0.36	+4.9
4,245,192	+	glnA	Shew_3554	0.50	+5.1
4,245,347	+	glnA	Shew_3554	0.61	+3.9
4,245,518	-	glnA	Shew_3554	0.73	+4.5
4,245,546	-	glnA	Shew_3554	0.75	+2.4
4,245,546	-	glnA	Shew_3554	0.75	+4.0
4,245,891	+				+2.2
4,246,060	-				+0.0
4,246,553	+		Shew_3555	0.36	-0.1
4,246,685	+		Shew_3555	0.52	+0.1
4,246,685	+		Shew_3555	0.52	-0.0
4,246,693	-		Shew_3555	0.53	-0.6