Strain Fitness in Shewanella loihica PV-4 around Shew_3433

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
4,098,643	+				+3.9
4,098,646	-				+1.6
4,098,953	+	pdhR	Shew_3432	0.45	+4.0
4,099,029	+	pdhR	Shew_3432	0.55	+4.5
4,099,185	-	pdhR	Shew_3432	0.75	+3.2
4,099,515	+				+0.2
4,099,783	-		Shew_3433	0.21	-0.7
4,099,992	+		Shew_3433	0.45	-0.5
4,100,001	+		Shew_3433	0.46	-0.2
4,100,007	+		Shew_3433	0.47	+0.2
4,100,156	-		Shew_3433	0.64	-0.2
4,100,162	+		Shew_3433	0.65	-0.4
4,100,231	+		Shew_3433	0.73	+0.2
4,100,277	-		Shew_3433	0.79	-1.9
4,100,510	+				+0.5
4,100,548	+				+0.1
4,100,580	+		Shew_3434	0.10	+0.5
4,100,598	+		Shew_3434	0.14	+0.4
4,100,857	+		Shew_3434	0.60	+0.4
4,100,864	+		Shew_3434	0.62	+0.8
4,100,864	+		Shew_3434	0.62	+0.7
4,100,865	-		Shew_3434	0.62	+0.7
4,100,865	-		Shew_3434	0.62	+1.0
4,100,865	-		Shew_3434	0.62	+0.6
4,100,872	-		Shew_3434	0.63	+1.0
4,100,899	+		Shew_3434	0.68	+1.4
4,100,928	+		Shew_3434	0.73	-0.3
4,100,945	-		Shew_3434	0.76	+0.5
4,100,967	-		Shew_3434	0.80	+0.8
4,101,081	-				-0.3
4,101,123	-				+0.1
4,101,156	-				+0.1
4,101,209	-				-0.0
4,101,314	+				+1.6