Strain Fitness in Shewanella loihica PV-4 around Shew_3392

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
4,040,113	+				+0.1
4,040,121	-				+1.5
4,040,151	-				-1.1
4,040,248	-				-0.5
4,040,387	-				-0.2
4,040,605	+				-0.9
4,040,605	+				-0.3
4,041,181	+		Shew_3392	0.24	+0.2
4,041,440	+		Shew_3392	0.47	+1.1
4,041,617	+		Shew_3392	0.62	+0.9
4,041,728	-		Shew_3392	0.71	+0.5
4,041,991	-				+0.5
4,042,314	+				+0.7
4,042,314	+				-3.0
4,042,338	+		Shew_3393	0.10	+0.1
4,042,356	-		Shew_3393	0.14	-0.4
4,042,365	-		Shew_3393	0.16	-0.2
4,042,407	-		Shew_3393	0.25	+1.5
4,042,467	+		Shew_3393	0.38	-0.4
4,042,502	+		Shew_3393	0.46	-0.0
4,042,617	+		Shew_3393	0.71	+0.0
4,042,765	+				+0.1
4,042,773	-				-1.8
4,042,783	-				-0.4
4,042,805	-				-0.6