Strain Fitness in Shewanella loihica PV-4 around Shew_3356

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
4,002,126	+		Shew_3355	0.83	-1.1
4,002,302	-				-0.4
4,002,850	+				+0.0
4,002,965	-				-0.1
4,003,112	-				-0.9
4,003,412	+				-0.1
4,003,534	+		Shew_3356	0.13	-0.0
4,003,542	-		Shew_3356	0.14	-0.0
4,003,608	+		Shew_3356	0.16	+0.0
4,003,730	-		Shew_3356	0.19	-0.7
4,003,730	-		Shew_3356	0.19	-0.3
4,003,771	+		Shew_3356	0.21	+0.3
4,003,779	-		Shew_3356	0.21	+0.2
4,003,779	-		Shew_3356	0.21	+0.1
4,003,870	-		Shew_3356	0.24	-0.2
4,003,870	-		Shew_3356	0.24	+0.1
4,003,984	-		Shew_3356	0.27	-1.0
4,004,340	+		Shew_3356	0.38	+0.2
4,004,340	+		Shew_3356	0.38	+0.0
4,004,340	+		Shew_3356	0.38	-0.6
4,004,348	-		Shew_3356	0.39	-0.1
4,004,602	-		Shew_3356	0.46	+0.2
4,004,635	-		Shew_3356	0.47	+0.3
4,004,985	+		Shew_3356	0.58	-0.5
4,004,999	+		Shew_3356	0.59	-0.4
4,005,034	+		Shew_3356	0.60	-0.8
4,005,066	+		Shew_3356	0.61	+0.4
4,005,081	-		Shew_3356	0.61	-0.3
4,005,242	-		Shew_3356	0.66	-0.6
4,005,332	-		Shew_3356	0.69	+0.0
4,005,338	+		Shew_3356	0.69	-0.1
4,005,338	+		Shew_3356	0.69	-0.1
4,005,409	-		Shew_3356	0.71	+0.0
4,005,584	-		Shew_3356	0.77	+0.3
4,005,632	+		Shew_3356	0.78	-0.2
4,005,694	+		Shew_3356	0.80	-0.1
4,005,734	-		Shew_3356	0.81	+0.0
4,005,864	-		Shew_3356	0.85	-0.9
4,005,932	-		Shew_3356	0.88	-0.2
4,005,934	+		Shew_3356	0.88	-0.8
4,005,944	+		Shew_3356	0.88	+0.9
4,005,962	-		Shew_3356	0.89	-0.0
4,006,056	+				+0.1
4,006,068	-				-0.1
4,006,090	-				+1.7
4,006,337	-				-1.8
4,006,676	-		Shew_3357	0.27	+0.3
4,006,754	+		Shew_3357	0.33	+0.1
4,007,006	+		Shew_3357	0.54	+0.4
4,007,086	+		Shew_3357	0.60	-0.5
4,007,109	-		Shew_3357	0.62	+1.8
4,007,155	+		Shew_3357	0.66	+0.5
4,007,327	-		Shew_3357	0.80	+0.3