Strain Fitness in Shewanella loihica PV-4 around Shew_3152

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
3,748,105	+		Shew_3151	0.76	+0.2
3,748,105	+		Shew_3151	0.76	+0.3
3,748,120	-		Shew_3151	0.77	+0.3
3,748,279	-		Shew_3151	0.82	+0.6
3,748,460	-		Shew_3151	0.87	-0.6
3,748,532	-		Shew_3151	0.90	-0.0
3,748,686	-				+0.2
3,748,765	-				+0.6
3,749,118	-				-0.3
3,749,137	+				+1.1
3,749,145	-				+0.1
3,749,145	-				+0.5
3,749,145	-				+0.1
3,749,189	+				-0.8
3,749,464	-				-0.3
3,749,651	-		Shew_3152	0.13	-0.0
3,749,834	-		Shew_3152	0.16	-0.6
3,749,893	-		Shew_3152	0.17	+0.2
3,749,905	-		Shew_3152	0.18	-0.3
3,750,043	+		Shew_3152	0.20	+0.4
3,750,053	+		Shew_3152	0.21	+0.1
3,750,210	-		Shew_3152	0.24	+0.2
3,750,477	-		Shew_3152	0.29	+0.3
3,750,531	-		Shew_3152	0.30	+0.1
3,750,807	-		Shew_3152	0.36	-2.6
3,751,175	+		Shew_3152	0.43	+0.1
3,751,183	-		Shew_3152	0.44	-0.8
3,751,183	-		Shew_3152	0.44	-0.1
3,751,235	+		Shew_3152	0.45	-0.4
3,751,342	+		Shew_3152	0.47	+0.2
3,751,501	+		Shew_3152	0.50	+0.1
3,751,679	+		Shew_3152	0.54	-0.2
3,752,185	-		Shew_3152	0.64	-0.2
3,752,307	-		Shew_3152	0.66	+0.1
3,752,476	+		Shew_3152	0.70	-0.6
3,752,484	-		Shew_3152	0.70	+0.3
3,752,522	+		Shew_3152	0.71	-0.4
3,752,695	+		Shew_3152	0.74	-1.7
3,752,695	+		Shew_3152	0.74	-0.7
3,752,884	+		Shew_3152	0.78	+0.2
3,752,944	+		Shew_3152	0.79	-0.1
3,753,120	-		Shew_3152	0.83	+0.4
3,753,130	-		Shew_3152	0.83	+0.1
3,753,178	-		Shew_3152	0.84	+0.3
3,753,247	+		Shew_3152	0.85	-1.6
3,753,261	-		Shew_3152	0.86	-1.1
3,753,670	+				-2.3
3,753,752	+				+0.0
3,753,752	+				-0.2
3,753,752	+				+0.5
3,753,760	-				-0.3
3,754,131	+				+0.1
3,754,232	-				+0.6
3,754,556	+				-0.3
3,754,588	+				-0.1
3,754,630	+		Shew_3153	0.10	+0.3
3,754,835	+		Shew_3153	0.31	+4.8
3,754,928	-		Shew_3153	0.40	-0.4
3,754,956	+		Shew_3153	0.43	+0.1