Strain Fitness in Shewanella loihica PV-4 around Shew_2380
Experiment: Fusidic 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,785,088 | - | Shew_2379 | 0.82 | -0.5 | |
2,785,581 | + | +0.2 | |||
2,786,257 | + | Shew_2380 | 0.45 | -0.4 | |
2,786,349 | + | Shew_2380 | 0.57 | -0.8 | |
2,786,410 | + | Shew_2380 | 0.65 | -0.5 | |
2,786,585 | + | Shew_2380 | 0.87 | -0.6 | |
2,786,710 | - | +0.2 | |||
2,786,750 | + | +0.9 | |||
2,787,111 | - | Shew_2381 | 0.30 | -0.6 | |
2,787,277 | + | Shew_2381 | 0.44 | -0.5 | |
2,787,421 | - | Shew_2381 | 0.55 | +0.0 | |
2,787,482 | + | Shew_2381 | 0.60 | -0.2 | |
2,787,482 | + | Shew_2381 | 0.60 | -0.1 | |
2,787,482 | + | Shew_2381 | 0.60 | +0.0 | |
2,787,490 | - | Shew_2381 | 0.61 | +0.4 | |
2,787,490 | - | Shew_2381 | 0.61 | +0.2 | |
2,787,517 | - | Shew_2381 | 0.63 | -0.6 | |
2,787,517 | - | Shew_2381 | 0.63 | -0.8 |
Or see this region's nucleotide sequence