Strain Fitness in Shewanella loihica PV-4 around Shew_1888

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,175,134	+		Shew_1887	0.83	+0.4
2,175,715	-				-0.2
2,175,932	-				+0.7
2,176,180	+		Shew_1888	0.19	+0.1
2,176,222	-		Shew_1888	0.20	-0.0
2,176,383	+		Shew_1888	0.26	+0.8
2,176,560	+		Shew_1888	0.32	+0.7
2,176,670	-		Shew_1888	0.36	+1.6
2,176,741	-		Shew_1888	0.39	-0.0
2,176,972	-		Shew_1888	0.47	+2.9
2,177,190	+		Shew_1888	0.54	+0.0
2,177,476	-		Shew_1888	0.65	-0.2
2,177,783	-		Shew_1888	0.75	+0.1
2,178,101	-		Shew_1888	0.87	+1.0
2,178,450	-				-0.1
2,178,508	-				+0.3
2,178,525	-				-0.4
2,178,903	-				-0.7
2,179,282	+		Shew_1889	0.20	-0.8
2,179,335	+		Shew_1889	0.23	-1.0
2,179,363	-		Shew_1889	0.25	-0.5