Strain Fitness in Shewanella loihica PV-4 around Shew_1403

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
1,614,787	-				+2.6
1,614,787	+				+2.4
1,614,787	+				+2.6
1,614,795	-				+4.0
1,614,811	+				+2.3
1,614,848	+				+3.0
1,614,933	-				+4.6
1,615,134	+		Shew_1402	0.28	+5.4
1,615,142	+		Shew_1402	0.29	+5.8
1,615,147	+		Shew_1402	0.29	+4.9
1,615,147	+		Shew_1402	0.29	+4.3
1,615,153	+		Shew_1402	0.30	+5.1
1,615,296	+		Shew_1402	0.46	+5.1
1,615,327	-		Shew_1402	0.50	+5.4
1,615,500	+		Shew_1402	0.70	+5.0
1,615,557	+		Shew_1402	0.76	+5.1
1,615,559	+		Shew_1402	0.76	+5.8
1,615,604	+		Shew_1402	0.82	+5.2
1,615,604	+		Shew_1402	0.82	+4.8
1,615,622	+		Shew_1402	0.84	+5.3
1,615,723	+				+5.0
1,615,780	+				+5.4
1,615,800	-				+7.4
1,615,853	+				+5.3
1,615,862	+		Shew_1403	0.10	+5.0
1,616,035	+		Shew_1403	0.30	+4.6
1,616,130	+		Shew_1403	0.41	+5.5
1,616,137	+		Shew_1403	0.42	+4.9
1,616,137	+		Shew_1403	0.42	+5.1
1,616,137	+		Shew_1403	0.42	+4.9
1,616,167	+		Shew_1403	0.45	+4.9
1,616,314	+		Shew_1403	0.62	+5.4
1,616,344	+		Shew_1403	0.66	+5.4
1,616,410	+		Shew_1403	0.73	+5.4
1,616,410	+		Shew_1403	0.73	+5.1
1,616,410	+		Shew_1403	0.73	+4.6
1,616,410	+		Shew_1403	0.73	+5.7
1,616,418	-		Shew_1403	0.74	+7.1
1,616,488	+		Shew_1403	0.82	+5.2
1,616,606	+				+2.5
1,616,614	-				+5.7
1,616,753	+		Shew_1404	0.20	+3.9
1,616,753	+		Shew_1404	0.20	+4.8
1,616,753	+		Shew_1404	0.20	+4.1
1,616,753	+		Shew_1404	0.20	+4.8
1,616,753	+		Shew_1404	0.20	+4.8
1,616,781	+		Shew_1404	0.25	+4.1
1,616,781	+		Shew_1404	0.25	+5.1
1,616,861	+		Shew_1404	0.40	+4.7
1,616,940	+		Shew_1404	0.54	+4.9
1,616,940	+		Shew_1404	0.54	+4.4
1,616,940	+		Shew_1404	0.54	+4.9
1,616,940	+		Shew_1404	0.54	+5.1
1,616,940	+		Shew_1404	0.54	+4.9
1,616,940	+		Shew_1404	0.54	+4.7
1,616,941	+		Shew_1404	0.55	+2.3
1,616,945	+		Shew_1404	0.55	+4.4
1,616,948	-		Shew_1404	0.56	+4.6
1,616,972	+		Shew_1404	0.60	+5.0
1,616,972	+		Shew_1404	0.60	+5.0
1,616,972	+		Shew_1404	0.60	+4.6
1,616,977	+		Shew_1404	0.61	+4.7
1,616,989	+		Shew_1404	0.63	+4.5
1,617,013	+		Shew_1404	0.68	+4.7
1,617,063	+		Shew_1404	0.77	+4.3
1,617,063	+		Shew_1404	0.77	+4.9
1,617,063	+		Shew_1404	0.77	+5.1
1,617,063	+		Shew_1404	0.77	+5.1
1,617,063	+		Shew_1404	0.77	+4.6
1,617,063	+		Shew_1404	0.77	+4.8
1,617,071	+		Shew_1404	0.78	+4.9
1,617,078	+		Shew_1404	0.80	+4.6
1,617,157	+				+4.0
1,617,163	-				+3.2
1,617,165	-				+3.8
1,617,211	+				+1.4
1,617,217	+				+1.6
1,617,217	+				+1.9
1,617,217	+				+1.7
1,617,217	+				+0.6
1,617,217	+				+1.7
1,617,223	+				+1.9
1,617,225	-				+3.6
1,617,376	+		Shew_1405	0.18	+1.3
1,617,455	+		Shew_1405	0.25	+0.7
1,617,455	+		Shew_1405	0.25	+1.6
1,617,556	+		Shew_1405	0.35	+2.8
1,617,559	+		Shew_1405	0.35	+2.0
1,617,634	+		Shew_1405	0.42	+1.8
1,617,634	+		Shew_1405	0.42	+1.5
1,617,634	+		Shew_1405	0.42	+1.6
1,617,634	+		Shew_1405	0.42	+2.3
1,617,634	+		Shew_1405	0.42	+1.1
1,617,634	+		Shew_1405	0.42	+1.7
1,617,634	+		Shew_1405	0.42	+1.8