Strain Fitness in Shewanella loihica PV-4 around Shew_1184

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
1,375,109	-		Shew_1183	0.85	-1.7
1,375,697	+				-0.3
1,375,734	+				+0.3
1,375,751	+				+0.2
1,375,751	+				+0.1
1,375,797	+				-0.6
1,375,818	+				+0.2
1,375,864	+		Shew_1184	0.12	-0.8
1,375,970	-		Shew_1184	0.19	+0.2
1,376,165	-		Shew_1184	0.31	-0.3
1,376,204	+		Shew_1184	0.33	+0.2
1,376,427	+		Shew_1184	0.47	-0.2
1,376,604	-		Shew_1184	0.58	-0.7
1,376,718	+		Shew_1184	0.65	-0.2
1,376,718	+		Shew_1184	0.65	+0.1
1,376,742	-		Shew_1184	0.66	-0.1
1,376,896	-		Shew_1184	0.76	-0.3
1,376,962	+		Shew_1184	0.80	-0.6
1,376,962	+		Shew_1184	0.80	-0.2
1,376,970	-		Shew_1184	0.80	-0.1
1,376,970	-		Shew_1184	0.80	-0.2
1,377,148	+				+0.0
1,377,689	+				+1.6
1,377,929	+	glyA	Shew_1185	0.24	+1.5
1,377,937	-	glyA	Shew_1185	0.24	+1.6
1,378,126	+	glyA	Shew_1185	0.40	+1.7