Strain Fitness in Shewanella loihica PV-4 around Shew_1131

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
1,306,412	+		Shew_1130	0.57	+0.1
1,306,420	-		Shew_1130	0.58	+0.0
1,306,420	-		Shew_1130	0.58	+0.1
1,306,420	-		Shew_1130	0.58	-0.5
1,306,511	+		Shew_1130	0.63	-0.3
1,306,670	+		Shew_1130	0.71	+0.0
1,306,678	-		Shew_1130	0.72	+1.3
1,306,678	-		Shew_1130	0.72	-0.1
1,306,791	-		Shew_1130	0.78	+0.2
1,306,826	-		Shew_1130	0.80	-0.3
1,307,112	-				+0.7
1,307,133	-				+0.4
1,307,133	-				-0.1
1,307,368	+				+0.7
1,307,726	-		Shew_1131	0.35	+0.3
1,307,769	+		Shew_1131	0.38	-0.1
1,307,769	+		Shew_1131	0.38	-0.4
1,307,805	+		Shew_1131	0.41	+0.1
1,308,403	+				+0.2
1,308,474	+				+0.4
1,309,196	+				-1.3
1,309,249	+				-0.3
1,309,367	+		Shew_1133	0.36	+0.1
1,309,375	-		Shew_1133	0.37	+0.2