Strain Fitness in Shewanella loihica PV-4 around Shew_0374
Experiment: Fusidic 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
420,254 | + | Shew_0372 | 0.14 | -1.5 | |
420,343 | + | Shew_0372 | 0.34 | -0.3 | |
420,613 | + | -0.4 | |||
420,780 | + | Shew_0373 | 0.33 | +0.0 | |
420,886 | + | Shew_0373 | 0.59 | -1.0 | |
420,886 | + | Shew_0373 | 0.59 | +0.4 | |
421,058 | + | -0.1 | |||
421,559 | + | hslU | Shew_0374 | 0.33 | +1.3 |
421,793 | - | hslU | Shew_0374 | 0.51 | +0.8 |
422,142 | + | hslU | Shew_0374 | 0.77 | +1.2 |
422,150 | - | hslU | Shew_0374 | 0.77 | +0.4 |
422,748 | + | Shew_0375 | 0.46 | +0.9 | |
423,158 | + | +0.4 | |||
423,412 | - | +0.1 |
Or see this region's nucleotide sequence