Strain Fitness in Shewanella loihica PV-4 around Shew_0124

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
132,489	-		Shew_0122	0.57	-1.2
132,521	+		Shew_0122	0.61	+0.3
132,521	+		Shew_0122	0.61	-0.7
132,545	+		Shew_0122	0.63	+0.4
132,639	-		Shew_0122	0.74	+0.0
132,669	+		Shew_0122	0.78	+0.2
132,680	+		Shew_0122	0.79	+0.6
132,737	+		Shew_0122	0.85	-0.2
132,815	-				-0.1
132,845	-				+0.1
132,929	-		Shew_0123	0.12	+0.1
132,949	-		Shew_0123	0.15	+0.2
133,068	+		Shew_0123	0.36	+0.5
133,068	+		Shew_0123	0.36	+0.1
133,076	-		Shew_0123	0.38	+0.1
133,093	-		Shew_0123	0.41	+0.1
133,206	-		Shew_0123	0.60	-0.1
133,391	-				-0.1
133,435	+				-0.3
133,463	+				+0.7
133,786	+		Shew_0124	0.22	-0.9
133,958	+		Shew_0124	0.33	-0.7
133,977	-		Shew_0124	0.34	+0.5
134,025	-		Shew_0124	0.37	-0.2
134,117	-		Shew_0124	0.42	-0.1
134,408	-		Shew_0124	0.61	+0.0
134,519	-		Shew_0124	0.67	-0.0
134,519	-		Shew_0124	0.67	+0.2
134,867	-		Shew_0124	0.89	-0.2
134,993	-				-0.3
135,104	-				+0.2
135,176	-				+0.1
135,194	-				-0.1
135,194	-				-0.5
135,368	+		Shew_0125	0.20	-0.1
135,810	+		Shew_0125	0.48	-0.7
135,818	-		Shew_0125	0.49	-0.1
135,989	+		Shew_0125	0.60	-0.8