Strain Fitness in Shewanella loihica PV-4 around Shew_0111

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
120,868	+		Shew_0110	0.20	+0.2
120,868	+		Shew_0110	0.20	-0.1
120,886	+		Shew_0110	0.22	-0.0
120,962	+		Shew_0110	0.31	-0.5
121,093	-		Shew_0110	0.46	+0.3
121,099	-		Shew_0110	0.47	-0.2
121,184	+		Shew_0110	0.57	-0.0
121,192	-		Shew_0110	0.57	+0.2
121,230	+		Shew_0110	0.62	-0.3
121,230	+		Shew_0110	0.62	-0.4
121,296	-		Shew_0110	0.69	-0.8
121,548	+				-0.2
121,556	-				+0.0
121,907	+		Shew_0111	0.11	-0.3
121,997	-		Shew_0111	0.14	-1.4
122,057	+		Shew_0111	0.16	+0.1
122,067	+		Shew_0111	0.17	-0.1
122,073	+		Shew_0111	0.17	-0.1
122,200	-		Shew_0111	0.22	-0.1
122,243	+		Shew_0111	0.24	-0.5
122,279	+		Shew_0111	0.25	-0.4
122,287	-		Shew_0111	0.25	-0.2
122,423	+		Shew_0111	0.30	+0.0
122,431	-		Shew_0111	0.31	-1.1
122,502	+		Shew_0111	0.33	-0.1
122,870	+		Shew_0111	0.48	-0.6
122,892	-		Shew_0111	0.49	+0.1
123,240	+		Shew_0111	0.62	-0.1
123,571	-		Shew_0111	0.75	-0.1
123,898	-		Shew_0111	0.87	-0.3
123,898	-		Shew_0111	0.87	+0.1
123,898	-		Shew_0111	0.87	-0.5
123,933	+		Shew_0111	0.89	+1.2
123,935	+		Shew_0111	0.89	+0.7
124,276	-				-0.3
124,400	-		Shew_0112	0.27	-0.9
124,439	+		Shew_0112	0.34	+0.6
124,454	-		Shew_0112	0.37	-2.6
124,733	+		Shew_0112	0.87	-0.1
125,225	+		Shew_0113	0.19	-0.0
125,225	+		Shew_0113	0.19	+0.2
125,225	+		Shew_0113	0.19	-0.0
125,227	+		Shew_0113	0.19	-2.0
125,227	+		Shew_0113	0.19	-0.2