Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT_t22

Experiment: aerobic shaking 48 hr copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy B
1,533,311	+				-1.5
1,533,318	-				+0.6
1,533,438	+				+2.2
1,533,438	+				-1.0
1,533,438	+				-0.9
1,533,478	+				-3.4
1,533,493	+				-1.3
1,533,545	+				-1.8
1,533,563	+				-2.7
1,533,597	+				+0.1
1,533,862	-				+0.1
1,533,912	+		BT1231	0.33	+0.1
1,534,036	+				-2.6
1,534,339	+	tRNA-Glu	BT_t22	0.60	-0.4
1,534,340	-	tRNA-Glu	BT_t22	0.61	+0.1
1,534,373	-				-1.2
1,534,377	+				-3.4
1,534,494	+		BT1232	0.29	+0.6
1,534,593	+		BT1232	0.76	-1.3
1,534,619	-		BT1232	0.89	-0.4
1,534,745	+				-1.4
1,534,809	-				-2.4
1,534,812	+				+0.1
1,534,921	-		BT1233	0.15	-1.5
1,534,923	-		BT1233	0.15	-0.9
1,535,177	-		BT1233	0.50	-2.4
1,535,182	+		BT1233	0.50	-0.4
1,535,206	-		BT1233	0.54	-0.9
1,535,219	-		BT1233	0.56	-1.2
1,535,248	+		BT1233	0.59	+0.6
1,535,352	-		BT1233	0.74	-1.8