Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3745 and Dshi_3746 are separated by 239 nucleotides Dshi_3746 and Dshi_3747 are separated by 306 nucleotides
Dshi_3745: Dshi_3745 - RC102 (RefSeq), at 151,632 to 152,987
_3745
Dshi_3746: Dshi_3746 - hypothetical protein (RefSeq), at 153,227 to 153,460
_3746
Dshi_3747: Dshi_3747 - hypothetical protein (RefSeq), at 153,767 to 154,930
_3747
Position (kb) 153
154 Strain fitness (log2 ratio) -1
0
1
2 at 152.380 kb on - strand, within Dshi_3745 at 153.218 kb on + strand at 153.298 kb on + strand, within Dshi_3746 at 153.409 kb on - strand, within Dshi_3746 at 153.443 kb on + strand at 153.516 kb on + strand at 153.538 kb on + strand at 153.611 kb on - strand at 153.738 kb on - strand at 153.772 kb on - strand at 153.772 kb on - strand at 153.774 kb on + strand at 153.881 kb on - strand at 153.881 kb on - strand at 153.927 kb on - strand, within Dshi_3747 at 154.064 kb on - strand, within Dshi_3747 at 154.091 kb on - strand, within Dshi_3747 at 154.127 kb on - strand, within Dshi_3747 at 154.164 kb on - strand, within Dshi_3747 at 154.198 kb on + strand, within Dshi_3747 at 154.223 kb on - strand, within Dshi_3747 at 154.225 kb on + strand, within Dshi_3747 at 154.251 kb on - strand, within Dshi_3747 at 154.304 kb on + strand, within Dshi_3747 at 154.328 kb on + strand, within Dshi_3747 at 154.396 kb on - strand, within Dshi_3747 at 154.433 kb on - strand, within Dshi_3747 at 154.442 kb on - strand, within Dshi_3747
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 152,380 - Dshi_3745 0.55 +0.5 153,218 + +0.8 153,298 + Dshi_3746 0.30 +1.1 153,409 - Dshi_3746 0.78 +2.0 153,443 + -0.3 153,516 + +0.6 153,538 + -0.5 153,611 - +0.3 153,738 - +0.2 153,772 - -1.7 153,772 - -0.0 153,774 + -1.3 153,881 - +1.5 153,881 - +0.2 153,927 - Dshi_3747 0.14 -0.1 154,064 - Dshi_3747 0.26 -0.0 154,091 - Dshi_3747 0.28 +0.5 154,127 - Dshi_3747 0.31 -1.0 154,164 - Dshi_3747 0.34 -0.3 154,198 + Dshi_3747 0.37 -0.3 154,223 - Dshi_3747 0.39 +1.0 154,225 + Dshi_3747 0.39 -0.6 154,251 - Dshi_3747 0.42 +0.0 154,304 + Dshi_3747 0.46 +0.6 154,328 + Dshi_3747 0.48 +0.4 154,396 - Dshi_3747 0.54 -0.9 154,433 - Dshi_3747 0.57 -0.2 154,442 - Dshi_3747 0.58 +0.1
Or see this region's nucleotide sequence