Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3462

Experiment: aerobic shaking 48 hr copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy B
4,456,541	+				-0.3
4,456,584	+		BT3460	0.75	-1.8
4,456,585	-		BT3460	0.75	-1.8
4,456,903	-				-0.8
4,456,903	-				-3.1
4,456,930	-				-2.0
4,457,514	+				-1.3
4,457,517	+				-1.5
4,457,721	+		BT3462	0.13	-3.3
4,457,769	+		BT3462	0.15	-2.8
4,457,845	+		BT3462	0.20	-1.4
4,458,073	+		BT3462	0.33	-2.6
4,458,173	+		BT3462	0.38	-2.3
4,458,255	+		BT3462	0.43	-1.7
4,458,510	+		BT3462	0.58	-2.4
4,458,539	-		BT3462	0.59	-1.0
4,458,731	+		BT3462	0.70	-1.5
4,458,820	+		BT3462	0.75	-1.8
4,458,820	+		BT3462	0.75	-3.4
4,458,820	+		BT3462	0.75	-1.7
4,459,015	+		BT3462	0.86	-0.7
4,459,045	+		BT3462	0.88	-0.7
4,459,131	+				-0.3
4,459,819	+				-3.0
4,459,828	+				-1.7
4,459,829	-				+2.3
4,459,993	-		BT3464	0.13	-1.0
4,459,993	-		BT3464	0.13	-1.8
4,459,993	-		BT3464	0.13	-3.0
4,460,097	+		BT3464	0.20	-0.8
4,460,183	+		BT3464	0.27	+0.3
4,460,184	-		BT3464	0.27	-0.3
4,460,186	-		BT3464	0.27	-0.7
4,460,186	-		BT3464	0.27	+0.3
4,460,249	+		BT3464	0.32	-0.3