Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3460

Experiment: aerobic shaking 48 hr copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy B
4,455,504	+				-2.0
4,455,504	+				-1.1
4,455,557	-				-2.6
4,455,572	-				-2.8
4,455,643	-				-1.0
4,455,645	-				-0.2
4,455,645	-				+0.3
4,455,647	-				-0.3
4,455,654	+				-2.9
4,455,674	-				+0.3
4,455,692	+				-2.1
4,455,769	-		BT3460	0.15	-0.4
4,455,798	-		BT3460	0.17	-0.3
4,455,825	+		BT3460	0.19	-2.8
4,455,877	+		BT3460	0.23	-1.3
4,456,013	-		BT3460	0.33	-3.1
4,456,013	-		BT3460	0.33	-2.6
4,456,013	-		BT3460	0.33	-2.3
4,456,124	+		BT3460	0.41	-1.0
4,456,541	+				-0.3
4,456,584	+		BT3460	0.75	-1.8
4,456,585	-		BT3460	0.75	-1.8
4,456,903	-				-0.8
4,456,903	-				-3.1
4,456,930	-				-2.0
4,457,514	+				-1.3
4,457,517	+				-1.5
4,457,721	+		BT3462	0.13	-3.3
4,457,769	+		BT3462	0.15	-2.8
4,457,845	+		BT3462	0.20	-1.4