Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2605

Experiment: aerobic shaking 48 hr copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy B
3,245,922	-				-1.4
3,246,014	+				-2.7
3,246,014	+				-3.0
3,246,014	+				+1.6
3,246,015	-				-1.5
3,246,040	-				-1.0
3,246,080	+				-0.4
3,246,242	+		BT2604	0.28	-2.6
3,246,242	+		BT2604	0.28	-2.4
3,246,244	+		BT2604	0.28	-2.5
3,246,247	-		BT2604	0.28	+2.8
3,246,485	+		BT2604	0.62	-2.1
3,246,672	+		BT2604	0.88	+0.2
3,246,694	+				-1.8
3,246,716	+				-3.4
3,246,716	+				-2.7
3,246,741	+				-1.7
3,246,741	+				-2.6
3,246,784	+				+0.6
3,246,784	+				-2.4
3,246,784	+				-1.1
3,246,789	+				-0.4
3,246,858	+		BT2605	0.11	-1.4
3,246,864	+		BT2605	0.14	-3.4
3,246,937	-		BT2605	0.51	+0.2
3,247,050	-				-1.8
3,247,100	+				-2.1
3,247,107	-				-1.0
3,247,194	+		BT2606	0.11	+0.2
3,247,195	-		BT2606	0.11	-2.7
3,247,356	-		BT2606	0.27	-1.0
3,247,454	+		BT2606	0.37	-1.1
3,247,513	+		BT2606	0.42	-1.3
3,247,513	+		BT2606	0.42	-0.8
3,247,562	-		BT2606	0.47	+1.3
3,247,627	+		BT2606	0.54	-2.0
3,247,698	+		BT2606	0.61	-2.2
3,247,778	+		BT2606	0.69	-2.5
3,247,778	+				-0.4
3,247,842	+		BT2606	0.75	+0.4
3,247,863	-		BT2606	0.77	-0.4
3,247,884	-		BT2606	0.79	-0.4
3,247,908	+		BT2606	0.82	-0.8
3,247,909	-		BT2606	0.82	-2.0
3,247,940	-		BT2606	0.85	-3.0
3,247,943	-		BT2606	0.85	-1.0
3,247,944	+		BT2606	0.85	-2.1
3,247,944	+		BT2606	0.85	-1.6
3,247,945	-		BT2606	0.85	-1.0
3,247,945	-		BT2606	0.85	+0.4
3,248,021	+				-2.8
3,248,027	+				-1.3