Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2529

Experiment: aerobic shaking 48 hr copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy B
3,159,948	-				-0.0
3,159,958	-				+0.6
3,160,007	-				-0.0
3,160,007	-				-0.8
3,160,007	-				-3.7
3,160,061	-				-0.2
3,160,129	-				-0.8
3,160,129	-				+0.1
3,160,163	-				-0.7
3,160,217	-				-2.1
3,160,344	+				-1.3
3,160,406	+		BT2529	0.14	-0.2
3,160,406	+		BT2529	0.14	-0.0
3,160,407	-		BT2529	0.14	-2.2
3,160,412	+		BT2529	0.15	-1.0
3,160,424	-		BT2529	0.16	-1.4
3,160,448	-		BT2529	0.18	-1.0
3,160,461	+		BT2529	0.19	-2.4
3,160,462	-		BT2529	0.19	-1.8
3,160,463	+		BT2529	0.19	-0.8
3,160,468	+		BT2529	0.20	-0.0
3,160,491	+		BT2529	0.22	-0.0
3,160,491	+		BT2529	0.22	-1.8
3,160,492	-		BT2529	0.22	-0.8
3,160,493	+		BT2529	0.22	-0.0
3,160,493	+		BT2529	0.22	-0.6
3,160,493	+		BT2529	0.22	-0.4
3,160,494	-		BT2529	0.22	+0.1
3,160,494	-		BT2529	0.22	-3.6
3,160,503	+		BT2529	0.23	-1.9
3,160,503	+		BT2529	0.23	+0.6
3,160,504	-		BT2529	0.23	-1.4
3,160,514	-		BT2529	0.24	-1.1
3,160,514	-		BT2529	0.24	-1.3
3,160,550	+		BT2529	0.28	-2.2
3,160,550	+		BT2529	0.28	-1.0
3,160,551	-		BT2529	0.28	-1.2
3,160,650	+		BT2529	0.37	-1.0
3,160,651	-		BT2529	0.37	-0.8
3,160,651	-		BT2529	0.37	+0.2
3,160,756	-		BT2529	0.47	-0.4
3,160,756	-		BT2529	0.47	-1.4
3,160,796	+		BT2529	0.51	-1.4
3,160,888	-		BT2529	0.59	-0.4
3,161,072	+		BT2529	0.76	-0.8
3,161,073	-		BT2529	0.76	-0.8
3,161,206	-		BT2529	0.89	-1.9
3,161,286	-				-1.6
3,161,352	-				+1.6
3,161,352	-				-1.4
3,161,382	-				-2.0
3,161,403	+				-0.6
3,161,418	+				-2.0
3,161,422	+				-0.4
3,161,422	+				-0.6
3,161,423	-				-0.1
3,161,458	+				-0.0
3,161,522	-				-1.0
3,161,664	-		BT2530	0.19	-1.8
3,161,667	+		BT2530	0.19	-1.1
3,161,668	-		BT2530	0.20	-0.6
3,161,751	+		BT2530	0.26	-1.6
3,161,752	-		BT2530	0.26	-0.2
3,161,757	+		BT2530	0.26	-1.5
3,161,758	-		BT2530	0.26	+0.6
3,161,758	-		BT2530	0.26	-0.4
3,161,763	-		BT2530	0.27	-2.5
3,161,840	-		BT2530	0.33	+3.1
3,161,840	-		BT2530	0.33	+1.6
3,161,850	+		BT2530	0.33	-3.3
3,161,979	-		BT2530	0.43	-0.2
3,161,984	-		BT2530	0.43	-0.9
3,161,984	-		BT2530	0.43	-1.2
3,161,984	-		BT2530	0.43	+0.2
3,161,984	-		BT2530	0.43	+0.2
3,162,102	-		BT2530	0.52	-1.9
3,162,102	-				+0.6
3,162,106	+		BT2530	0.53	-3.9
3,162,140	-		BT2530	0.55	-1.0
3,162,193	+		BT2530	0.59	-0.8
3,162,193	+		BT2530	0.59	-0.0
3,162,193	+		BT2530	0.59	-0.8
3,162,193	+		BT2530	0.59	+1.2
3,162,193	+		BT2530	0.59	-1.6
3,162,194	-		BT2530	0.59	-0.7
3,162,194	-		BT2530	0.59	-2.4
3,162,195	+		BT2530	0.59	-0.0
3,162,195	+		BT2530	0.59	-2.2
3,162,196	-		BT2530	0.59	-0.8
3,162,230	-		BT2530	0.62	-1.4