Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2523

Experiment: aerobic shaking 48 hr copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy B
3,147,246	+		BT2522	0.51	-2.4
3,147,430	+		BT2522	0.65	-0.4
3,147,431	-		BT2522	0.65	+0.1
3,147,431	-		BT2522	0.65	-2.3
3,147,432	+		BT2522	0.65	-0.8
3,147,432	+		BT2522	0.65	-1.4
3,147,432	+		BT2522	0.65	-1.8
3,147,441	-		BT2522	0.65	-0.2
3,147,468	-		BT2522	0.67	-2.2
3,147,486	-		BT2522	0.69	-2.6
3,147,545	-		BT2522	0.73	-0.3
3,147,614	+		BT2522	0.78	+3.0
3,147,619	+		BT2522	0.78	-0.0
3,147,619	+		BT2522	0.78	+0.6
3,147,619	+		BT2522	0.78	+1.6
3,147,620	-		BT2522	0.78	-1.6
3,147,695	+		BT2522	0.84	-3.5
3,147,695	+		BT2522	0.84	-0.5
3,147,696	-		BT2522	0.84	-2.1
3,147,696	-		BT2522	0.84	-1.8
3,147,696	-		BT2522	0.84	-0.0
3,147,696	-		BT2522	0.84	-1.2
3,147,719	-		BT2522	0.86	-1.1
3,147,741	+		BT2522	0.87	-0.1
3,147,742	-		BT2522	0.87	-0.2
3,147,742	-		BT2522	0.87	-1.1
3,147,799	+				+1.6
3,147,835	+				-1.4
3,147,835	+				-0.2
3,147,913	+				-0.6
3,147,932	+				-1.7
3,147,973	-				-3.0
3,147,981	+				-1.0
3,147,982	-				+0.4
3,147,982	-				-0.8
3,147,982	-				-2.0
3,147,982	-				+2.6
3,148,014	-				-1.2
3,148,023	+				-0.7
3,148,042	-				+1.6
3,148,047	+				-2.6
3,148,047	+				+1.6
3,148,048	-				-1.2
3,148,068	+				-0.2
3,148,069	-				-0.2
3,148,110	-				-0.4
3,148,146	-				-0.9
3,148,198	-				-2.3
3,148,225	+				+1.0
3,148,225	+				-1.8
3,148,253	-				-0.5
3,148,286	+				-1.0
3,148,287	+				-1.6
3,148,377	+				-1.4
3,148,411	-				+0.1
3,148,489	+		BT2523	0.11	-1.0
3,148,600	-		BT2523	0.14	-0.4
3,148,724	+		BT2523	0.18	+1.2
3,148,725	-		BT2523	0.18	-0.0
3,148,725	-		BT2523	0.18	+0.2
3,148,728	+		BT2523	0.18	+0.3
3,148,848	+		BT2523	0.21	-1.8
3,148,851	-		BT2523	0.21	-0.7
3,148,861	+		BT2523	0.22	-0.9
3,148,862	-		BT2523	0.22	-2.0
3,148,871	+		BT2523	0.22	-0.8
3,148,871	+		BT2523	0.22	-1.1
3,148,872	-		BT2523	0.22	+1.9
3,148,872	-		BT2523	0.22	+1.6
3,148,872	-		BT2523	0.22	+2.6
3,148,875	+		BT2523	0.22	-2.8
3,148,876	-		BT2523	0.22	-0.8
3,148,876	-		BT2523	0.22	-0.6
3,148,908	+		BT2523	0.23	-3.5
3,148,908	+		BT2523	0.23	+1.4
3,148,909	-		BT2523	0.23	-1.3
3,148,910	+		BT2523	0.23	-1.0
3,148,938	-		BT2523	0.24	-1.7
3,148,983	+		BT2523	0.25	-1.8
3,149,087	+		BT2523	0.28	-2.6
3,149,088	-		BT2523	0.28	+0.6
3,149,102	+		BT2523	0.29	-1.3
3,149,103	-		BT2523	0.29	-4.0
3,149,194	+		BT2523	0.31	-3.6
3,149,195	-		BT2523	0.31	+0.2
3,149,244	-		BT2523	0.33	+0.9
3,149,288	-		BT2523	0.34	-2.1
3,149,292	+		BT2523	0.34	-0.8
3,149,349	+		BT2523	0.36	-1.6
3,149,349	+		BT2523	0.36	-0.8
3,149,350	-		BT2523	0.36	-1.0
3,149,350	-		BT2523	0.36	-1.3
3,149,442	+		BT2523	0.38	-0.0
3,149,572	-		BT2523	0.42	-2.1
3,149,587	-		BT2523	0.43	-1.0
3,149,609	-		BT2523	0.43	-3.1
3,149,625	+		BT2523	0.44	+0.6
3,149,627	+		BT2523	0.44	-0.4
3,149,627	+		BT2523	0.44	-1.5
3,149,627	+		BT2523	0.44	-0.5
3,149,631	-		BT2523	0.44	-0.0
3,149,741	+		BT2523	0.47	+0.8
3,149,741	+		BT2523	0.47	-2.1
3,149,744	+		BT2523	0.47	-0.0
3,149,771	+		BT2523	0.48	+0.2
3,149,981	+		BT2523	0.54	+0.6
3,149,984	-		BT2523	0.54	-0.5
3,149,986	-		BT2523	0.54	-1.2
3,149,988	-		BT2523	0.54	-1.7
3,149,988	-		BT2523	0.54	-1.8
3,150,025	-		BT2523	0.55	+0.8
3,150,091	-		BT2523	0.57	-0.8
3,150,243	+				-0.8
3,150,243	+		BT2523	0.61	-0.2
3,150,244	-		BT2523	0.62	-2.2
3,150,330	+		BT2523	0.64	+1.6
3,150,331	-		BT2523	0.64	-2.5
3,150,332	+		BT2523	0.64	-1.2
3,150,434	-		BT2523	0.67	-1.2
3,150,486	-		BT2523	0.69	-1.1
3,150,486	-		BT2523	0.69	+0.5
3,150,528	+		BT2523	0.70	-0.2
3,150,537	-		BT2523	0.70	+1.0
3,150,584	+		BT2523	0.71	-2.0
3,150,585	-		BT2523	0.71	-1.2
3,150,628	-		BT2523	0.73	-1.5
3,150,628	-		BT2523	0.73	-0.7
3,150,659	-		BT2523	0.74	-0.0
3,150,663	+		BT2523	0.74	-0.7
3,150,663	+		BT2523	0.74	+0.3
3,150,663	+		BT2523	0.74	-0.8
3,150,663	+		BT2523	0.74	-2.5
3,150,675	-		BT2523	0.74	-2.7
3,150,675	-		BT2523	0.74	+2.6
3,151,007	+		BT2523	0.84	-0.6
3,151,053	+		BT2523	0.85	-1.0
3,151,053	+		BT2523	0.85	+0.2
3,151,053	+		BT2523	0.85	-2.5
3,151,054	-		BT2523	0.85	-3.0
3,151,055	+		BT2523	0.85	+0.8
3,151,058	+		BT2523	0.85	+0.6
3,151,058	+		BT2523	0.85	+0.6
3,151,058	+		BT2523	0.85	+2.0
3,151,059	-		BT2523	0.85	-3.2
3,151,080	-		BT2523	0.86	-1.8
3,151,158	+		BT2523	0.88	-1.3
3,151,162	+		BT2523	0.88	-1.4
3,151,183	-		BT2523	0.89	-0.9
3,151,202	-		BT2523	0.89	+1.6
3,151,202	-		BT2523	0.89	-2.6
3,151,234	-				+0.6
3,151,240	+				-2.8
3,151,303	+				+0.2
3,151,424	-				-0.8
3,151,444	+				-1.5
3,151,445	-				-1.5
3,151,520	-				-0.9
3,151,523	-				-1.0
3,151,529	-				-2.1
3,151,591	-				-0.8
3,151,593	-				-1.2
3,151,772	+				-2.1
3,151,773	-				-0.2
3,151,904	+		BT2524	0.12	-1.6
3,151,924	-		BT2524	0.13	-1.0
3,151,948	+		BT2524	0.14	-0.0
3,152,037	-		BT2524	0.17	-1.6
3,152,037	-		BT2524	0.17	+0.1
3,152,132	+		BT2524	0.21	-0.8
3,152,132	+		BT2524	0.21	-0.0
3,152,177	+		BT2524	0.23	-1.4
3,152,260	-		BT2524	0.26	+0.6
3,152,279	+		BT2524	0.26	-0.4
3,152,381	-		BT2524	0.30	-1.9
3,152,447	+		BT2524	0.33	-2.0
3,152,447	+		BT2524	0.33	-2.8
3,152,448	-		BT2524	0.33	-2.8
3,152,462	+		BT2524	0.33	-0.7
3,152,463	-		BT2524	0.33	-0.0
3,152,495	-		BT2524	0.35	-3.4