Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2159

Experiment: aerobic shaking 48 hr copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy B
2,717,962	+				-2.0
2,717,965	+				-0.4
2,718,058	+		BT2159	0.11	+0.1
2,718,111	+		BT2159	0.16	+0.2
2,718,190	+		BT2159	0.23	+1.6
2,718,227	+		BT2159	0.27	-0.2
2,718,228	-		BT2159	0.27	-0.5
2,718,272	-		BT2159	0.31	-1.2
2,718,293	+		BT2159	0.32	+0.6
2,718,293	+		BT2159	0.32	-1.9
2,718,294	-		BT2159	0.33	-1.4
2,718,294	-		BT2159	0.33	+2.2
2,718,294	-		BT2159	0.33	-0.5
2,718,296	-		BT2159	0.33	-1.0
2,718,298	+		BT2159	0.33	+0.6
2,718,299	-		BT2159	0.33	+0.8
2,718,302	+		BT2159	0.33	-1.4
2,718,303	-		BT2159	0.33	+0.3
2,718,303	-		BT2159	0.33	+0.6
2,718,419	-		BT2159	0.44	-0.0
2,718,420	+		BT2159	0.44	-1.0
2,718,421	-		BT2159	0.44	-1.2
2,718,457	+		BT2159	0.47	+0.6
2,718,460	-		BT2159	0.47	+0.2
2,718,495	+		BT2159	0.50	+1.2
2,718,495	+		BT2159	0.50	-0.4
2,718,578	-		BT2159	0.58	+2.1
2,718,591	-		BT2159	0.59	+1.6
2,718,599	+		BT2159	0.60	+2.0
2,718,619	-		BT2159	0.62	-0.4
2,718,634	+		BT2159	0.63	+2.3
2,718,639	+		BT2159	0.63	-0.3
2,718,677	+		BT2159	0.67	-0.6
2,718,697	+		BT2159	0.69	-2.2
2,718,697	+		BT2159	0.69	-1.1
2,718,697	+		BT2159	0.69	-0.0
2,718,754	+		BT2159	0.74	-0.0
2,718,755	-		BT2159	0.74	-0.7
2,718,773	-		BT2159	0.75	-0.7
2,718,830	+		BT2159	0.80	-1.0
2,718,831	-		BT2159	0.81	-1.4
2,718,867	-		BT2159	0.84	-1.5
2,718,922	+		BT2159	0.89	+2.2
2,719,017	-				-2.2
2,719,517	+		BT2160	0.13	-0.7
2,719,581	+		BT2160	0.17	-1.2
2,719,651	+		BT2160	0.21	-1.4
2,719,652	-		BT2160	0.21	+0.6
2,719,667	-		BT2160	0.22	-0.7
2,719,701	-		BT2160	0.24	-1.4
2,719,703	-		BT2160	0.24	+0.8
2,719,738	-		BT2160	0.26	-0.4
2,719,840	+		BT2160	0.32	+1.6
2,719,894	+		BT2160	0.35	-0.0
2,720,006	-		BT2160	0.42	-1.2
2,720,006	-		BT2160	0.42	+0.3
2,720,018	-		BT2160	0.43	-1.0