Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2030

Experiment: aerobic shaking 48 hr copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy B
2,546,160	-				+0.7
2,546,164	+				-2.5
2,546,164	+				+0.7
2,546,183	+				-2.6
2,546,189	+				-2.3
2,546,203	-				-1.0
2,546,235	-		BT2029	0.13	+1.7
2,546,841	+				-0.7
2,546,842	-				+0.1
2,546,926	-				-1.1
2,546,949	-				+0.1
2,546,961	+				-0.7
2,547,022	+				-0.2
2,547,064	-				-0.8
2,547,328	+		BT2030	0.30	-2.2
2,547,398	-		BT2030	0.38	-1.7
2,547,437	+		BT2030	0.42	-3.9
2,547,456	+		BT2030	0.44	-1.3
2,547,578	-		BT2030	0.57	-2.4
2,547,578	-		BT2030	0.57	-0.7
2,547,579	+		BT2030	0.58	+0.7
2,547,584	+		BT2030	0.58	-2.3
2,547,584	+		BT2030	0.58	-1.4
2,547,588	+		BT2030	0.59	+0.7
2,547,672	+		BT2030	0.68	-1.8
2,547,673	-		BT2030	0.68	+0.3
2,547,695	+		BT2030	0.70	-4.0
2,547,695	+		BT2030	0.70	-2.6
2,547,696	-		BT2030	0.70	+0.2
2,547,703	-		BT2030	0.71	-2.7
2,547,970	+				+0.1
2,548,009	-				-1.5
2,548,062	+				-1.8
2,548,068	-		BT2031	0.11	-0.3
2,548,127	+		BT2031	0.26	-0.7
2,548,156	+		BT2031	0.34	+0.1
2,548,158	+		BT2031	0.34	-1.9
2,548,203	+		BT2031	0.46	+1.0
2,548,203	+		BT2031	0.46	+0.4
2,548,230	+		BT2031	0.53	-2.2
2,548,267	+		BT2031	0.62	-1.3
2,548,339	+		BT2031	0.81	+1.7
2,548,363	-		BT2031	0.87	-0.9
2,548,387	-				-1.9
2,548,399	-				-2.2
2,548,409	+				-2.3
2,548,553	+				-2.3
2,548,757	+				-1.0
2,548,758	-				-3.3
2,548,758	-				-1.2
2,548,844	+				+0.7