Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1462

Experiment: aerobic shaking 48 hr copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy B
1,800,816	+				-2.0
1,800,821	+				-0.4
1,800,834	-				+0.9
1,800,840	+				+0.8
1,800,845	-				-2.3
1,800,845	-				-0.2
1,800,869	-				-1.2
1,800,914	-				-2.5
1,800,916	+				-1.3
1,800,919	-				-1.9
1,800,920	+				+0.6
1,801,005	+				-1.2
1,801,010	+				-1.7
1,801,048	+				+0.0
1,801,048	+				-0.7
1,801,092	+				-2.3
1,801,183	+		BT1461	0.19	-1.6
1,801,207	-		BT1461	0.26	-1.7
1,801,217	-		BT1461	0.28	+0.0
1,801,232	+		BT1461	0.33	+0.3
1,801,291	+		BT1461	0.50	-0.4
1,801,292	-		BT1461	0.50	-1.7
1,801,300	+		BT1461	0.52	+1.8
1,801,322	-		BT1461	0.59	+0.0
1,801,322	-		BT1461	0.59	+0.0
1,801,324	+		BT1461	0.59	-3.0
1,801,361	+		BT1461	0.70	+1.0
1,801,371	-		BT1461	0.73	-1.8
1,801,372	+		BT1461	0.73	-2.8
1,801,491	+				-1.5
1,801,517	+				+0.6
1,801,518	-				-1.8
1,801,561	-				-1.7
1,801,598	-				+0.0
1,801,603	-				-0.7
1,801,603	-				+0.2
1,801,604	+				+0.6
1,801,607	-				-1.0
1,801,748	+				+0.0
1,801,774	+				-1.1
1,801,775	-				+0.6
1,801,797	-				-1.3
1,801,954	-		BT1462	0.34	-4.3
1,801,961	+		BT1462	0.36	-1.0
1,802,116	+		BT1462	0.70	-3.3
1,802,182	+		BT1462	0.85	-1.7
1,802,203	-		BT1462	0.90	-0.5
1,802,276	-				-1.5
1,802,319	-				-1.2
1,802,433	-				-0.7
1,802,476	+				+0.0
1,802,499	-				-1.2
1,802,589	-		BT1463	0.13	-1.5
1,802,667	-		BT1463	0.27	-0.4
1,802,669	-		BT1463	0.27	-0.2
1,802,669	-		BT1463	0.27	-1.5
1,802,669	-		BT1463	0.27	+0.3
1,802,691	-		BT1463	0.31	-1.0
1,802,774	+		BT1463	0.46	-2.0
1,802,799	-		BT1463	0.50	-2.0
1,802,942	+		BT1463	0.76	-1.5
1,802,948	-		BT1463	0.77	-1.7
1,802,948	-		BT1463	0.77	-3.2
1,802,985	+		BT1463	0.83	-0.4
1,803,044	+				+0.6
1,803,045	-				-0.4
1,803,106	+				-3.2
1,803,110	+				-2.8
1,803,110	+				-0.7
1,803,111	-				-1.2
1,803,111	-				-1.2
1,803,113	-				-1.1
1,803,127	+				+0.2
1,803,207	+				-0.6
1,803,208	-				-1.2
1,803,236	-				-2.1