Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1115

Experiment: aerobic shaking 48 hr copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy B
1,400,743	+		BT1114	0.14	-0.6
1,400,865	+		BT1114	0.26	-2.0
1,400,983	-		BT1114	0.37	-0.4
1,400,988	-		BT1114	0.38	+0.0
1,400,988	-		BT1114	0.38	-2.3
1,401,022	+		BT1114	0.41	-1.0
1,401,096	+		BT1114	0.48	-1.2
1,401,097	-		BT1114	0.48	-1.3
1,401,108	+		BT1114	0.49	-1.2
1,401,191	+		BT1114	0.57	-0.7
1,401,191	+		BT1114	0.57	-0.4
1,401,191	+		BT1114	0.57	-1.1
1,401,350	+		BT1114	0.73	+0.0
1,401,462	+		BT1114	0.84	-0.4
1,401,471	+		BT1114	0.84	-0.4
1,401,490	-		BT1114	0.86	-2.2
1,401,552	-				-0.8
1,401,580	+				-1.2
1,401,703	-				-2.1
1,401,843	+		BT1115	0.18	-2.3
1,401,870	-		BT1115	0.20	-2.7
1,401,979	+		BT1115	0.29	-2.2
1,401,980	-		BT1115	0.30	-1.9
1,401,992	+		BT1115	0.31	-3.1
1,402,024	+		BT1115	0.33	-1.7
1,402,025	-		BT1115	0.33	+0.0
1,402,418	+		BT1115	0.67	-1.2
1,402,958	+				-0.2
1,402,968	+				-0.2
1,402,981	+				-0.4
1,402,992	+				-1.2
1,403,003	+		BT1116	0.12	-1.1
1,403,110	+		BT1116	0.31	-0.6
1,403,110	+		BT1116	0.31	+0.6
1,403,133	+		BT1116	0.35	+1.0
1,403,133	+				+0.0
1,403,133	+				+1.6
1,403,135	+		BT1116	0.35	+0.2
1,403,155	-		BT1116	0.39	-0.7
1,403,180	+		BT1116	0.43	-2.2
1,403,188	+		BT1116	0.45	-3.0
1,403,321	+		BT1116	0.69	-1.2
1,403,333	+		BT1116	0.71	-0.4
1,403,362	+		BT1116	0.76	-0.2
1,403,490	+				-0.4
1,403,496	-				-2.9
1,403,565	+				-1.7
1,403,616	+				+0.6
1,403,616	+				-2.9
1,403,616	+				-1.2
1,403,664	+		BT1117	0.19	-3.1
1,403,738	-		BT1117	0.40	-1.4
1,403,758	+		BT1117	0.45	-0.4
1,403,762	+		BT1117	0.46	-0.7