Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0685

Experiment: aerobic shaking 48 hr copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy B
850,505	-		BT0684	0.67	-1.8
850,505	-		BT0684	0.67	-1.6
850,506	+		BT0684	0.67	-2.5
850,762	+		BT0684	0.82	+0.2
850,832	+		BT0684	0.87	-0.8
851,174	+				-0.8
851,310	+				-1.1
851,373	-				+0.8
851,375	+				-1.2
851,386	+				-1.6
851,398	-				+0.2
851,605	+		BT0685	0.14	-0.8
851,687	+		BT0685	0.19	-0.2
851,688	-		BT0685	0.19	-0.8
851,754	-		BT0685	0.24	-1.1
851,768	-		BT0685	0.25	-3.2
851,771	-		BT0685	0.25	+2.8
851,948	+		BT0685	0.37	+1.2
851,955	-		BT0685	0.37	+0.2
852,055	-		BT0685	0.44	-0.2
852,098	-		BT0685	0.47	-0.1
852,185	-				+1.8
852,185	-		BT0685	0.53	-1.1
852,360	+		BT0685	0.65	+0.6
852,517	-		BT0685	0.75	+0.8
852,558	-		BT0685	0.78	+0.2
852,582	-		BT0685	0.80	+0.2
852,617	+		BT0685	0.82	-2.2
852,617	+		BT0685	0.82	+1.2
852,652	+		BT0685	0.85	+0.8
852,653	-		BT0685	0.85	+0.8
852,689	-		BT0685	0.87	+1.3
852,774	-				-1.1
852,848	+				-0.1
852,885	-				-0.6
852,890	-				-0.6
853,041	+				-1.1
853,140	+				+0.0
853,187	-		BT0686	0.12	-0.8
853,187	-		BT0686	0.12	-2.3
853,267	-		BT0686	0.19	-0.8
853,402	+		BT0686	0.30	+0.7
853,418	-		BT0686	0.31	+2.7
853,457	-		BT0686	0.35	-0.6
853,549	+		BT0686	0.42	-1.9
853,735	-		BT0686	0.58	-1.4
853,737	-		BT0686	0.58	+0.7
853,737	-		BT0686	0.58	-1.1
853,753	+		BT0686	0.60	-0.6
853,859	+		BT0686	0.69	-0.8