Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0507

Experiment: aerobic shaking 48 hr copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy B
628,275	-		BT0506	0.64	+0.8
628,357	+		BT0506	0.68	-0.8
628,524	+		BT0506	0.75	-1.3
628,534	-		BT0506	0.75	+0.2
628,549	+		BT0506	0.76	+1.7
628,587	+		BT0506	0.78	+0.4
628,615	-		BT0506	0.79	+0.3
628,657	+		BT0506	0.81	-0.6
628,658	-		BT0506	0.81	+0.7
628,716	+		BT0506	0.83	-0.8
628,827	-		BT0506	0.88	-1.3
628,959	+				-0.6
628,961	+				-0.1
629,046	-				+0.2
629,135	+				-0.2
629,136	-				-1.6
629,139	-				-1.6
629,140	+				+0.1
629,140	+				-1.8
629,141	-				-1.7
629,164	+				+0.2
629,172	+				-1.2
629,308	+		BT0507	0.12	-0.3
629,309	-		BT0507	0.12	-2.2
629,309	-		BT0507	0.12	-0.8
629,350	+		BT0507	0.19	+0.8
629,350	+		BT0507	0.19	-1.9
629,442	+		BT0507	0.34	-1.1
629,442	+		BT0507	0.34	+1.8
629,442	+		BT0507	0.34	-2.2
629,443	-		BT0507	0.34	-1.1
629,443	-		BT0507	0.34	+1.8
629,444	+		BT0507	0.34	-0.8
629,446	+		BT0507	0.35	-1.6
629,447	-		BT0507	0.35	-1.1
629,473	-		BT0507	0.39	+0.2
629,558	-		BT0507	0.53	-1.8
629,629	+		BT0507	0.65	-1.6
629,633	-		BT0507	0.66	-1.4
629,796	-				-1.6
629,796	-				-0.8
629,839	-				+0.8
629,900	-				-0.7
630,091	+		BT0508	0.10	+0.8
630,116	+		BT0508	0.12	+0.2
630,172	-		BT0508	0.15	-0.6
630,173	-		BT0508	0.15	-0.7
630,348	-		BT0508	0.24	-0.6
630,537	-		BT0508	0.35	+0.8
630,621	-		BT0508	0.39	-1.8
630,656	-		BT0508	0.41	-0.6
630,737	-		BT0508	0.46	-0.6