Experiment: aerobic shaking 48 hr copy B
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0469 and BT0470 overlap by 1 nucleotides BT0470 and BT0471 are separated by 6 nucleotides
BT0469: BT0469 - hypothetical protein (NCBI ptt file), at 580,260 to 581,522
BT0469
BT0470: BT0470 - hypothetical protein (NCBI ptt file), at 581,522 to 582,751
BT0470
BT0471: BT0471 - glycosyltransferase (NCBI ptt file), at 582,758 to 583,972
BT0471
Position (kb) 581
582
583 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 580.524 kb on - strand, within BT0469 at 580.606 kb on - strand, within BT0469 at 580.639 kb on + strand, within BT0469 at 580.889 kb on - strand, within BT0469 at 580.988 kb on - strand, within BT0469 at 581.052 kb on - strand, within BT0469 at 581.089 kb on - strand, within BT0469 at 581.243 kb on - strand, within BT0469 at 581.258 kb on - strand, within BT0469 at 581.597 kb on + strand at 581.624 kb on - strand at 581.633 kb on - strand at 581.675 kb on - strand, within BT0470 at 581.797 kb on - strand, within BT0470 at 581.966 kb on - strand, within BT0470 at 582.071 kb on - strand, within BT0470 at 582.086 kb on - strand, within BT0470 at 582.100 kb on - strand, within BT0470 at 582.115 kb on - strand, within BT0470 at 582.115 kb on - strand, within BT0470 at 582.125 kb on - strand, within BT0470 at 582.125 kb on - strand, within BT0470 at 582.152 kb on - strand, within BT0470 at 582.257 kb on - strand, within BT0470 at 582.260 kb on - strand, within BT0470 at 582.260 kb on - strand, within BT0470 at 582.303 kb on - strand, within BT0470 at 582.307 kb on - strand, within BT0470 at 582.307 kb on - strand, within BT0470 at 582.391 kb on - strand, within BT0470 at 582.409 kb on - strand, within BT0470 at 582.426 kb on - strand, within BT0470 at 582.449 kb on - strand, within BT0470 at 582.498 kb on - strand, within BT0470 at 582.509 kb on - strand, within BT0470 at 582.667 kb on - strand at 582.667 kb on - strand at 582.835 kb on - strand at 583.013 kb on - strand, within BT0471 at 583.058 kb on - strand, within BT0471 at 583.147 kb on - strand, within BT0471 at 583.257 kb on + strand, within BT0471 at 583.303 kb on - strand, within BT0471 at 583.420 kb on - strand, within BT0471 at 583.424 kb on + strand, within BT0471 at 583.425 kb on - strand, within BT0471 at 583.425 kb on - strand, within BT0471 at 583.427 kb on - strand, within BT0471 at 583.669 kb on + strand, within BT0471 at 583.751 kb on - strand, within BT0471
Per-strain Table
Position Strand Gene LocusTag Fraction aerobic shaking 48 hr copy B remove 580,524 - BT0469 0.21 -1.0 580,606 - BT0469 0.27 -0.9 580,639 + BT0469 0.30 -1.0 580,889 - BT0469 0.50 +0.2 580,988 - BT0469 0.58 -0.6 581,052 - BT0469 0.63 +0.4 581,089 - BT0469 0.66 -2.8 581,243 - BT0469 0.78 -1.6 581,258 - BT0469 0.79 -1.4 581,597 + -0.2 581,624 - +0.8 581,633 - +0.8 581,675 - BT0470 0.12 -2.1 581,797 - BT0470 0.22 -2.4 581,966 - BT0470 0.36 -0.2 582,071 - BT0470 0.45 -0.6 582,086 - BT0470 0.46 -3.0 582,100 - BT0470 0.47 -0.2 582,115 - BT0470 0.48 +2.5 582,115 - BT0470 0.48 +1.1 582,125 - BT0470 0.49 -0.2 582,125 - BT0470 0.49 +0.2 582,152 - BT0470 0.51 +1.8 582,257 - BT0470 0.60 -0.5 582,260 - BT0470 0.60 +0.2 582,260 - BT0470 0.60 +0.4 582,303 - BT0470 0.63 -0.4 582,307 - BT0470 0.64 -1.2 582,307 - BT0470 0.64 -0.2 582,391 - BT0470 0.71 -2.8 582,409 - BT0470 0.72 -0.8 582,426 - BT0470 0.73 -1.4 582,449 - BT0470 0.75 -0.6 582,498 - BT0470 0.79 -0.2 582,509 - BT0470 0.80 +1.2 582,667 - -2.2 582,667 - +0.2 582,835 - -0.6 583,013 - BT0471 0.21 -1.2 583,058 - BT0471 0.25 -0.2 583,147 - BT0471 0.32 -0.4 583,257 + BT0471 0.41 +2.2 583,303 - BT0471 0.45 -0.6 583,420 - BT0471 0.54 -1.5 583,424 + BT0471 0.55 -0.2 583,425 - BT0471 0.55 -0.9 583,425 - BT0471 0.55 -2.0 583,427 - BT0471 0.55 +1.8 583,669 + BT0471 0.75 -1.8 583,751 - BT0471 0.82 +0.5
Or see this region's nucleotide sequence