Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0312

Experiment: aerobic shaking 48 hr copy B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy B
374,089	-		BT0311	0.34	-2.5
374,146	-		BT0311	0.38	-0.3
374,165	-		BT0311	0.40	-1.0
374,174	-		BT0311	0.40	+0.7
374,290	+		BT0311	0.49	-0.7
374,291	-		BT0311	0.49	-1.7
374,348	-		BT0311	0.53	-1.3
374,474	+		BT0311	0.62	-3.4
374,476	+		BT0311	0.62	-1.3
374,477	-		BT0311	0.62	-0.2
374,492	+		BT0311	0.63	-0.7
374,520	-		BT0311	0.65	-1.2
374,667	+		BT0311	0.76	-1.2
374,668	-		BT0311	0.76	-1.3
374,671	+		BT0311	0.77	-1.7
374,671	+		BT0311	0.77	-0.3
374,674	-		BT0311	0.77	-0.9
374,734	+		BT0311	0.81	+1.7
374,740	+		BT0311	0.82	+0.1
374,740	+		BT0311	0.82	-1.9
374,741	-		BT0311	0.82	-1.2
374,828	-		BT0311	0.88	-0.2
374,869	+				-0.4
374,888	-				-3.0
374,910	-				+0.3
374,922	+				-1.2
374,932	+				-1.5
375,014	-				+0.7
375,043	-				-1.9
375,049	+				-1.8
375,348	-		BT0312	0.16	-0.7
375,348	-		BT0312	0.16	-0.9
375,380	+		BT0312	0.17	-1.8
375,449	-		BT0312	0.21	-3.8
375,449	-		BT0312	0.21	-0.7
375,451	-		BT0312	0.21	-2.2
375,451	-		BT0312	0.21	-1.3
375,497	+		BT0312	0.23	+0.7
375,525	-		BT0312	0.24	-2.0
375,666	-		BT0312	0.31	+0.3
375,669	+		BT0312	0.31	+1.7
375,727	-		BT0312	0.34	-2.2
375,758	-		BT0312	0.36	-0.2
375,807	-		BT0312	0.38	-0.7
375,838	-		BT0312	0.40	-1.3
375,890	+		BT0312	0.42	-3.1
375,947	-		BT0312	0.45	-0.5
376,231	+		BT0312	0.59	-1.7
376,260	-		BT0312	0.60	+1.1
376,265	-		BT0312	0.61	-2.0
376,265	-		BT0312	0.61	-0.8
376,268	+		BT0312	0.61	-1.5
376,363	-		BT0312	0.65	-1.8
376,400	+		BT0312	0.67	-1.2
376,443	+		BT0312	0.69	-1.5
376,443	+		BT0312	0.69	-1.2
376,444	-		BT0312	0.69	-0.7
376,445	+		BT0312	0.69	-2.2
376,446	-		BT0312	0.70	-0.7
376,460	-		BT0312	0.70	-1.4
376,461	+		BT0312	0.70	-1.5
376,478	-		BT0312	0.71	-1.3
376,511	+		BT0312	0.73	-1.8
376,511	+		BT0312	0.73	-0.7
376,511	+		BT0312	0.73	-0.7
376,553	-		BT0312	0.75	-3.7
376,706	+		BT0312	0.82	-1.8
376,706	+		BT0312	0.82	-1.8
376,707	-		BT0312	0.82	-2.9
376,707	-		BT0312	0.82	-1.3
376,718	+		BT0312	0.83	+0.1
376,719	-		BT0312	0.83	-0.7
376,814	+		BT0312	0.88	-1.5
376,967	+				-0.0
376,973	+				-1.7
376,974	-				-1.3
377,083	+				+0.4
377,083	+				-2.2
377,085	+				+0.2
377,088	+				-1.3
377,090	+				-0.4
377,090	+				-1.8
377,091	-				-2.0
377,112	+				-1.9
377,242	+		BT0313	0.29	+1.7
377,243	-		BT0313	0.29	-0.3
377,280	-		BT0313	0.37	+0.3
377,280	-		BT0313	0.37	-0.8
377,296	+		BT0313	0.40	-1.2
377,578	+				-0.7
377,612	+				+1.1
377,646	-				+0.7
377,648	+				-0.3
377,650	+				-0.2
377,651	-				-0.9
377,728	-				+0.7
377,778	+				+0.7
377,779	-				-1.4
377,785	-				+0.1
377,788	-				+0.1
377,793	+				-2.3
377,793	+				+1.7
377,796	-				+0.7
377,796	-				-1.9
377,859	-				-0.3
377,899	-				-2.9
377,905	+				-2.9
377,964	-		BT0314	0.13	-0.3
378,048	+		BT0314	0.23	-1.7