Experiment: aerobic shaking 48 hr copy B
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0292 and BT0293 are separated by 4 nucleotides BT0293 and BT0294 are separated by 38 nucleotides
BT0292: BT0292 - conserved hypothetical protein (NCBI ptt file), at 341,115 to 341,864
BT0292
BT0293: BT0293 - hypothetical protein (NCBI ptt file), at 341,869 to 343,101
BT0293
BT0294: BT0294 - hypothetical protein (NCBI ptt file), at 343,140 to 344,570
BT0294
Position (kb) 341
342
343
344 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 340.966 kb on - strand at 341.024 kb on - strand at 341.031 kb on - strand at 341.102 kb on - strand at 341.102 kb on - strand at 341.106 kb on - strand at 341.162 kb on - strand at 341.334 kb on - strand, within BT0292 at 341.343 kb on - strand, within BT0292 at 341.425 kb on - strand, within BT0292 at 341.425 kb on - strand, within BT0292 at 341.425 kb on - strand, within BT0292 at 341.425 kb on - strand, within BT0292 at 341.466 kb on - strand, within BT0292 at 341.516 kb on - strand, within BT0292 at 341.581 kb on + strand, within BT0292 at 341.625 kb on - strand, within BT0292 at 341.638 kb on - strand, within BT0292 at 341.850 kb on - strand at 341.883 kb on + strand at 341.886 kb on + strand at 341.891 kb on + strand at 341.892 kb on - strand at 341.896 kb on - strand at 342.033 kb on - strand, within BT0293 at 342.035 kb on - strand, within BT0293 at 342.037 kb on - strand, within BT0293 at 342.047 kb on - strand, within BT0293 at 342.055 kb on - strand, within BT0293 at 342.056 kb on + strand, within BT0293 at 342.334 kb on - strand, within BT0293 at 342.355 kb on - strand, within BT0293 at 342.355 kb on - strand, within BT0293 at 342.631 kb on - strand, within BT0293 at 342.733 kb on - strand, within BT0293 at 342.767 kb on - strand, within BT0293 at 342.815 kb on - strand, within BT0293 at 342.839 kb on - strand, within BT0293 at 343.408 kb on + strand, within BT0294 at 343.409 kb on - strand, within BT0294 at 343.416 kb on + strand, within BT0294 at 343.547 kb on - strand, within BT0294 at 343.568 kb on + strand, within BT0294 at 343.568 kb on + strand, within BT0294 at 343.568 kb on + strand, within BT0294 at 343.569 kb on - strand, within BT0294 at 343.569 kb on - strand, within BT0294 at 343.592 kb on + strand, within BT0294 at 343.740 kb on - strand, within BT0294 at 343.761 kb on - strand, within BT0294 at 343.826 kb on - strand, within BT0294 at 343.838 kb on - strand, within BT0294 at 343.947 kb on - strand, within BT0294 at 343.951 kb on + strand, within BT0294 at 343.955 kb on + strand, within BT0294 at 344.034 kb on + strand, within BT0294 at 344.035 kb on - strand, within BT0294 at 344.043 kb on - strand, within BT0294
Per-strain Table
Position Strand Gene LocusTag Fraction aerobic shaking 48 hr copy B remove 340,966 - +0.9 341,024 - -2.0 341,031 - +0.7 341,102 - -1.2 341,102 - -1.6 341,106 - -0.9 341,162 - -0.7 341,334 - BT0292 0.29 -1.3 341,343 - BT0292 0.30 -0.9 341,425 - BT0292 0.41 -1.3 341,425 - BT0292 0.41 +0.7 341,425 - BT0292 0.41 -1.3 341,425 - BT0292 0.41 +0.5 341,466 - BT0292 0.47 -0.3 341,516 - BT0292 0.53 +0.1 341,581 + BT0292 0.62 -0.7 341,625 - BT0292 0.68 -0.2 341,638 - BT0292 0.70 -0.3 341,850 - -1.7 341,883 + -0.9 341,886 + -0.9 341,891 + -1.2 341,892 - -0.7 341,896 - -3.7 342,033 - BT0293 0.13 -3.0 342,035 - BT0293 0.13 -2.6 342,037 - BT0293 0.14 -3.0 342,047 - BT0293 0.14 -0.7 342,055 - BT0293 0.15 -0.9 342,056 + BT0293 0.15 +1.7 342,334 - BT0293 0.38 -2.8 342,355 - BT0293 0.39 -1.2 342,355 - BT0293 0.39 -1.9 342,631 - BT0293 0.62 +1.7 342,733 - BT0293 0.70 +0.7 342,767 - BT0293 0.73 -0.3 342,815 - BT0293 0.77 -1.1 342,839 - BT0293 0.79 -1.2 343,408 + BT0294 0.19 -1.7 343,409 - BT0294 0.19 +1.7 343,416 + BT0294 0.19 +0.3 343,547 - BT0294 0.28 -0.9 343,568 + BT0294 0.30 +0.7 343,568 + BT0294 0.30 +1.7 343,568 + BT0294 0.30 +1.1 343,569 - BT0294 0.30 -1.2 343,569 - BT0294 0.30 +2.7 343,592 + BT0294 0.32 +0.1 343,740 - BT0294 0.42 -0.9 343,761 - BT0294 0.43 -0.7 343,826 - BT0294 0.48 -1.2 343,838 - BT0294 0.49 -2.0 343,947 - BT0294 0.56 +0.1 343,951 + BT0294 0.57 +0.1 343,955 + BT0294 0.57 -1.7 344,034 + BT0294 0.62 -1.2 344,035 - BT0294 0.63 -0.7 344,043 - BT0294 0.63 +1.7
Or see this region's nucleotide sequence