Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08360

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,569,486	+		MMP_RS08350	0.35	+0.2
1,569,667	-				-0.1
1,569,690	+				+0.1
1,569,850	-		MMP_RS08355	0.24	-0.4
1,569,851	+		MMP_RS08355	0.24	+0.0
1,569,983	-		MMP_RS08355	0.42	+0.8
1,569,984	+		MMP_RS08355	0.42	+0.0
1,569,985	-		MMP_RS08355	0.42	+0.2
1,569,986	+		MMP_RS08355	0.42	+0.3
1,570,215	-		MMP_RS08355	0.72	+0.7
1,570,228	+		MMP_RS08355	0.74	-0.1
1,570,239	+		MMP_RS08355	0.75	+0.3
1,570,450	-				-0.3
1,570,451	+				+0.4
1,570,506	-		MMP_RS08360	0.22	+0.1
1,570,507	+		MMP_RS08360	0.23	-1.4
1,570,559	+		MMP_RS08360	0.39	-0.3
1,570,601	-		MMP_RS08360	0.53	-0.3
1,570,609	-		MMP_RS08360	0.56	-0.8
1,570,749	+				-0.3
1,570,764	-				+0.5
1,570,764	-				-1.3
1,570,765	+				-0.2
1,570,765	+				+0.4
1,570,765	+				+0.3
1,570,766	-				+0.3
1,570,766	-				-0.7
1,570,834	-				-0.3
1,570,835	+				+0.4
1,570,844	-				-0.2
1,570,844	-				+0.2
1,570,845	+				-0.5
1,570,845	+				+1.0
1,570,845	+				+0.3
1,571,192	-		MMP_RS08365	0.30	-0.1
1,571,549	-		MMP_RS08365	0.54	-0.4
1,571,618	-		MMP_RS08365	0.59	+0.2
1,571,618	-		MMP_RS08365	0.59	-0.3
1,571,618	-		MMP_RS08365	0.59	+0.2