Strain Fitness in Pantoea sp. MT58 around IAI47_04995

Experiment: Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
1,048,978	+				-2.9
1,049,015	+				-0.8
1,049,016	-				+1.6
1,049,016	-				+2.0
1,049,016	-				-1.3
1,049,023	-				-0.6
1,049,032	+				-2.4
1,049,032	+				-2.5
1,049,066	+				-3.7
1,049,067	-				+0.6
1,049,067	-				+1.3
1,049,067	-				-2.5
1,049,067	-				+0.3
1,049,067	-				+0.4
1,049,912	+				-0.4
1,049,913	-				+0.2
1,049,913	-				-2.2
1,049,917	+				+0.9
1,049,918	-				-0.3
1,049,920	+				+1.8
1,049,930	-				+3.6
1,049,930	-				-2.3
1,049,938	+				-0.4
1,049,956	+				+1.5
1,049,956	+				+1.5
1,049,963	-				-0.4
1,049,963	-				-0.1
1,049,979	-				-1.9
1,049,979	-				+0.2
1,049,984	+				-0.0
1,049,985	-				-0.3
1,050,015	-				+0.9
1,050,055	+		IAI47_04995	0.12	-1.2
1,050,055	+		IAI47_04995	0.12	-0.8
1,050,056	-		IAI47_04995	0.12	-0.3
1,050,056	-		IAI47_04995	0.12	+0.2
1,050,056	-		IAI47_04995	0.12	-1.8
1,050,056	-		IAI47_04995	0.12	+1.5
1,050,056	-		IAI47_04995	0.12	+0.6
1,050,056	-		IAI47_04995	0.12	+1.6
1,050,059	+		IAI47_04995	0.12	+0.6
1,050,059	+		IAI47_04995	0.12	-2.8
1,050,059	+		IAI47_04995	0.12	+0.2
1,050,059	+		IAI47_04995	0.12	+0.9
1,050,060	-		IAI47_04995	0.12	+0.8
1,050,060	-		IAI47_04995	0.12	-1.5
1,050,060	-		IAI47_04995	0.12	+1.0
1,050,066	+		IAI47_04995	0.13	+1.4
1,050,066	+		IAI47_04995	0.13	-1.7
1,050,066	+		IAI47_04995	0.13	-0.1
1,050,067	-		IAI47_04995	0.13	-0.8
1,050,067	-		IAI47_04995	0.13	+2.1
1,050,067	-		IAI47_04995	0.13	-1.4
1,050,067	-		IAI47_04995	0.13	+2.1
1,050,104	+		IAI47_04995	0.18	+1.1
1,050,104	+		IAI47_04995	0.18	-0.2
1,050,105	-		IAI47_04995	0.18	+0.2
1,050,105	-		IAI47_04995	0.18	-1.8
1,050,105	-		IAI47_04995	0.18	+1.5
1,050,146	+		IAI47_04995	0.24	-0.1
1,050,355	-		IAI47_04995	0.52	+1.6
1,050,384	+		IAI47_04995	0.55	-1.8
1,050,384	+		IAI47_04995	0.55	+0.1
1,050,384	+		IAI47_04995	0.55	+0.2
1,050,384	+		IAI47_04995	0.55	-1.0
1,050,419	+		IAI47_04995	0.60	-0.4
1,050,419	+		IAI47_04995	0.60	-0.3
1,050,420	-		IAI47_04995	0.60	-1.0
1,050,426	+		IAI47_04995	0.61	+0.2
1,050,426	+		IAI47_04995	0.61	-1.8
1,050,426	+		IAI47_04995	0.61	-1.8
1,050,427	-		IAI47_04995	0.61	-1.0
1,050,483	+		IAI47_04995	0.69	-2.0
1,050,484	-		IAI47_04995	0.69	+1.2
1,050,528	+		IAI47_04995	0.75	-0.5
1,050,528	+		IAI47_04995	0.75	+1.4
1,050,529	-		IAI47_04995	0.75	-2.5
1,050,529	-		IAI47_04995	0.75	+2.2
1,050,536	+		IAI47_04995	0.76	-1.3
1,050,536	+		IAI47_04995	0.76	+1.8
1,050,536	+		IAI47_04995	0.76	+0.9
1,050,537	-		IAI47_04995	0.76	-0.8
1,050,537	-		IAI47_04995	0.76	+0.2
1,050,537	-		IAI47_04995	0.76	+1.9
1,050,578	+		IAI47_04995	0.81	+0.0
1,050,579	-		IAI47_04995	0.81	+1.8
1,050,599	+		IAI47_04995	0.84	-0.7
1,050,599	+		IAI47_04995	0.84	+0.0
1,050,613	+		IAI47_04995	0.86	+1.4
1,050,613	+		IAI47_04995	0.86	-2.0
1,050,614	-		IAI47_04995	0.86	-0.8
1,050,614	-		IAI47_04995	0.86	-1.0
1,050,614	-		IAI47_04995	0.86	-0.0
1,050,615	+		IAI47_04995	0.86	+0.8
1,050,615	+		IAI47_04995	0.86	+0.0
1,050,616	-		IAI47_04995	0.86	-0.7
1,050,616	-		IAI47_04995	0.86	+0.2
1,050,616	-		IAI47_04995	0.86	-1.5
1,050,710	+				+1.0
1,050,711	-				-1.8
1,050,714	-				-1.4
1,050,738	+				+1.5
1,050,759	+				-0.1
1,050,763	+				-0.2
1,050,763	+				-1.4
1,050,811	+				+0.2
1,050,811	+				-0.1
1,050,811	+				+0.7
1,050,811	+				-0.8
1,050,834	-				-0.2
1,050,834	-				-1.8
1,050,834	-				-1.3
1,050,849	+				-0.8
1,050,849	+				-1.4
1,050,849	+				+1.2
1,050,850	-				-0.2
1,050,850	-				+0.2
1,050,874	+				+0.1
1,050,875	-				-1.7
1,050,939	+		IAI47_05000	0.18	+2.0
1,050,970	+		IAI47_05000	0.24	+1.3
1,050,970	+		IAI47_05000	0.24	-0.3
1,050,970	+		IAI47_05000	0.24	-1.9
1,050,970	+		IAI47_05000	0.24	-1.4
1,050,983	+		IAI47_05000	0.27	-0.8
1,050,983	+		IAI47_05000	0.27	+0.2
1,050,999	+		IAI47_05000	0.30	-1.1
1,051,042	+		IAI47_05000	0.39	-1.5
1,051,042	+		IAI47_05000	0.39	-1.8
1,051,049	+		IAI47_05000	0.40	-2.5
1,051,049	+		IAI47_05000	0.40	+0.1
1,051,053	+		IAI47_05000	0.41	-0.7
1,051,053	+		IAI47_05000	0.41	+2.3
1,051,089	+		IAI47_05000	0.48	-1.4
1,051,172	+		IAI47_05000	0.65	-2.3
1,051,172	+		IAI47_05000	0.65	-1.9
1,051,218	+		IAI47_05000	0.74	+0.8
1,051,218	+		IAI47_05000	0.74	-0.7
1,051,218	+		IAI47_05000	0.74	-1.5
1,051,218	+		IAI47_05000	0.74	-1.9
1,051,218	+		IAI47_05000	0.74	+0.9
1,051,221	+		IAI47_05000	0.74	-1.9
1,051,221	+		IAI47_05000	0.74	-1.7
1,051,221	+		IAI47_05000	0.74	-1.8
1,051,221	+		IAI47_05000	0.74	+0.2
1,051,221	+		IAI47_05000	0.74	-0.4
1,051,243	-		IAI47_05000	0.79	+0.8
1,051,287	+		IAI47_05000	0.88	+0.6
1,051,288	-		IAI47_05000	0.88	-1.6
1,051,288	-		IAI47_05000	0.88	-1.7
1,051,323	+				+2.4
1,051,323	+				-1.8
1,051,323	+				-2.4
1,051,323	+				-0.4
1,051,323	+				-1.7
1,051,323	+				-1.2
1,051,324	-				+1.0
1,051,324	-				-2.7
1,051,324	-				-0.9
1,051,324	-				-0.5
1,051,324	-				-1.3
1,051,324	-				-2.5
1,051,397	+				+1.6
1,051,397	+				-3.4
1,051,399	+				+1.3
1,051,399	+				-0.5
1,051,399	+				+0.2
1,051,399	+				-0.3
1,051,407	+				-1.3
1,051,407	+				-0.4
1,051,407	+				-0.2