Strain Fitness in Pantoea sp. MT58 around IAI47_00155

Experiment: Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
31,183	-				-2.3
31,183	-				-0.9
31,191	+				+0.4
31,191	+				+0.7
31,191	+				-3.5
31,191	+				-1.7
31,191	+				-2.7
31,191	+				-1.4
31,191	+				+0.9
31,191	+				+3.2
31,192	-				-0.2
31,192	-				+3.4
31,192	-				-1.3
31,192	-				-0.7
31,192	-				+0.1
31,192	-				-1.6
31,243	-				+1.9
31,285	-				-2.3
31,294	+				-0.1
31,295	-				+2.2
31,295	-				-1.0
31,295	-				-0.7
31,295	-				-2.0
31,295	-				-0.7
31,295	-				-2.6
31,295	-				-0.7
31,295	-				-2.1
31,295	-				-2.6
31,295	-				+1.5
31,295	-				-1.4
31,298	+				+3.5
31,298	+				+2.0
31,298	+				+1.9
31,299	-				-1.8
31,299	-				-0.7
31,299	-				-2.8
31,299	-				-3.7
31,299	-				-1.6
31,313	+				+2.3
31,314	-				-1.8
31,317	+				-1.4
31,318	-				+1.4
31,343	+				-1.4
31,343	+				-1.9
31,343	+				-1.2
31,343	+				-0.5
31,343	+				+0.4
31,344	-				+1.1
31,356	-				+2.7
31,358	+				+2.2
31,358	+				+0.4
31,358	+				-1.7
31,358	+				+0.7
31,358	+				+1.3
31,359	-				-1.3
31,359	-				-0.5
31,430	+				-1.0
31,430	+				+0.2
31,430	+				-0.1
31,430	+				+0.7
31,430	+				-0.4
31,430	+				-3.4
31,430	+				+3.5
31,430	+				+2.1
31,430	+				+2.1
31,431	-				-2.7
31,431	-				-1.2
31,431	-				-1.8
31,431	-				+0.5
31,431	-				+1.8
31,431	-				-1.2
31,431	-				-1.0
31,431	-				-1.0
31,439	+				-2.7
31,510	+		IAI47_00150	0.18	-3.1
31,511	-		IAI47_00150	0.18	-3.9
31,602	+		IAI47_00150	0.32	+0.3
31,643	+		IAI47_00150	0.38	-2.6
31,643	+		IAI47_00150	0.38	+0.0
31,643	+		IAI47_00150	0.38	-2.3
31,644	-		IAI47_00150	0.38	-0.6
31,650	+		IAI47_00150	0.39	+2.4
31,651	-		IAI47_00150	0.39	+1.3
31,692	+		IAI47_00150	0.45	-1.6
31,692	+		IAI47_00150	0.45	-2.1
31,692	+		IAI47_00150	0.45	-1.8
31,693	-		IAI47_00150	0.45	-0.6
31,693	-		IAI47_00150	0.45	-1.8
31,729	+		IAI47_00150	0.50	+0.4
31,729	+		IAI47_00150	0.50	-1.9
31,771	+		IAI47_00150	0.56	+1.2
31,772	-		IAI47_00150	0.56	-0.7
31,772	-		IAI47_00150	0.56	+0.2
31,772	-		IAI47_00150	0.56	+0.3
31,842	-		IAI47_00150	0.67	+1.4
31,864	+		IAI47_00150	0.70	-1.0
31,864	+		IAI47_00150	0.70	-1.8
31,864	+		IAI47_00150	0.70	-1.1
31,864	+		IAI47_00150	0.70	+0.9
31,864	+		IAI47_00150	0.70	+0.8
31,864	+		IAI47_00150	0.70	-2.6
31,865	-		IAI47_00150	0.70	+1.4
31,865	-		IAI47_00150	0.70	+2.7
31,865	-		IAI47_00150	0.70	+0.1
31,865	-		IAI47_00150	0.70	-2.1
31,865	-		IAI47_00150	0.70	+2.3
31,865	-		IAI47_00150	0.70	+3.0
31,865	-		IAI47_00150	0.70	+1.3
31,865	-		IAI47_00150	0.70	-3.2
31,871	-		IAI47_00150	0.71	-0.2
31,871	-		IAI47_00150	0.71	-0.7
31,871	-		IAI47_00150	0.71	+0.2
31,871	-		IAI47_00150	0.71	+2.5
31,871	-		IAI47_00150	0.71	-0.1
31,871	-		IAI47_00150	0.71	+1.2
31,884	+		IAI47_00150	0.73	+0.6
31,884	+		IAI47_00150	0.73	-3.0
31,884	+		IAI47_00150	0.73	-0.7
31,885	-		IAI47_00150	0.73	-1.7
31,885	-		IAI47_00150	0.73	+1.4
31,885	-		IAI47_00150	0.73	-0.6
31,885	-		IAI47_00150	0.73	+0.6
31,885	-		IAI47_00150	0.73	+1.4
32,023	-				-0.2
32,041	+				+1.3
32,041	+				+0.9
32,042	-				+1.3
32,042	-				-1.8
32,043	+				-0.6
32,044	-				+1.1
32,044	-				-1.0
32,068	+				-1.1
32,068	+				-0.6
32,069	-				-0.5
32,069	-				-1.1
32,078	+				-0.5
32,078	+				-2.7
32,104	+				-1.4
32,109	+				+0.4
32,145	-				+1.3
32,145	-				-0.8
32,165	+				-3.0
32,165	+				-2.0
32,165	+				+1.4
32,166	-				-0.6
32,166	-				+2.4
32,166	-				-1.4
32,166	-				-0.3
32,166	-				+1.2
32,219	+		IAI47_00155	0.11	-0.8
32,220	-		IAI47_00155	0.11	+0.1
32,232	+		IAI47_00155	0.13	+2.0
32,232	+		IAI47_00155	0.13	-0.5
32,232	+		IAI47_00155	0.13	+1.2
32,232	+		IAI47_00155	0.13	-1.1
32,232	+		IAI47_00155	0.13	+0.4
32,232	+		IAI47_00155	0.13	+2.2
32,233	-		IAI47_00155	0.13	-0.7
32,233	-		IAI47_00155	0.13	+1.5
32,233	-		IAI47_00155	0.13	-1.1
32,233	-		IAI47_00155	0.13	+1.5
32,279	+		IAI47_00155	0.20	+1.6
32,279	+		IAI47_00155	0.20	+0.7
32,331	-		IAI47_00155	0.27	+1.9
32,331	-		IAI47_00155	0.27	-0.4
32,374	+		IAI47_00155	0.34	+0.1
32,374	+		IAI47_00155	0.34	+1.9
32,375	-		IAI47_00155	0.34	+1.9
32,375	-		IAI47_00155	0.34	+0.5
32,375	-		IAI47_00155	0.34	-1.0
32,388	+		IAI47_00155	0.36	-0.7
32,388	+		IAI47_00155	0.36	-1.7
32,389	-		IAI47_00155	0.36	-0.5
32,389	-		IAI47_00155	0.36	-1.3
32,389	-		IAI47_00155	0.36	+0.2
32,429	+		IAI47_00155	0.42	+1.3
32,578	+		IAI47_00155	0.64	-1.1
32,578	+		IAI47_00155	0.64	-0.8
32,579	-		IAI47_00155	0.64	-0.6
32,646	+		IAI47_00155	0.74	+3.1
32,646	+		IAI47_00155	0.74	-1.4
32,646	+		IAI47_00155	0.74	-0.2
32,646	+		IAI47_00155	0.74	-1.1
32,646	+		IAI47_00155	0.74	-2.2
32,646	+		IAI47_00155	0.74	-0.4
32,646	+		IAI47_00155	0.74	-2.1
32,646	+		IAI47_00155	0.74	+0.1
32,647	-		IAI47_00155	0.74	-2.7
32,647	-		IAI47_00155	0.74	-0.7
32,697	+		IAI47_00155	0.81	-1.3
32,698	-		IAI47_00155	0.81	-1.1
32,698	-		IAI47_00155	0.81	-1.8
32,727	+		IAI47_00155	0.85	-0.4
32,728	-		IAI47_00155	0.86	-0.7
32,728	-		IAI47_00155	0.86	-1.1
32,860	+				+0.7
32,861	-				-2.1
32,869	+				+0.9
32,869	-				-0.2
32,870	-				+0.6
32,874	+				+1.5
32,874	+				-2.6
32,874	+				+2.2
32,874	+				+0.6
32,874	+				-0.5
32,874	+				+0.7
32,874	+				+0.9
32,874	+				-2.4
32,874	+				+0.5