Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS01330 and CA265_RS01335 are separated by 32 nucleotides CA265_RS01335 and CA265_RS01340 are separated by 147 nucleotides CA265_RS01340 and CA265_RS01345 are separated by 57 nucleotides
CA265_RS01330: CA265_RS01330 - alcohol dehydrogenase AdhP, at 335,163 to 336,197
_RS01330
CA265_RS01335: CA265_RS01335 - pyridoxamine 5'-phosphate oxidase, at 336,230 to 336,685
_RS01335
CA265_RS01340: CA265_RS01340 - hypothetical protein, at 336,833 to 338,614
_RS01340
CA265_RS01345: CA265_RS01345 - PAS domain-containing sensor histidine kinase, at 338,672 to 339,862
_RS01345
Position (kb) 336
337
338
339 Strain fitness (log2 ratio) -1
0
1
2 at 335.868 kb on - strand, within CA265_RS01330 at 335.878 kb on + strand, within CA265_RS01330 at 335.987 kb on + strand, within CA265_RS01330 at 336.014 kb on - strand, within CA265_RS01330 at 336.125 kb on + strand at 336.182 kb on + strand at 336.183 kb on - strand at 336.196 kb on - strand at 336.204 kb on - strand at 336.207 kb on - strand at 336.243 kb on + strand at 336.282 kb on - strand, within CA265_RS01335 at 336.282 kb on - strand, within CA265_RS01335 at 336.282 kb on - strand, within CA265_RS01335 at 336.282 kb on - strand, within CA265_RS01335 at 336.283 kb on + strand, within CA265_RS01335 at 336.283 kb on + strand, within CA265_RS01335 at 336.284 kb on - strand, within CA265_RS01335 at 336.315 kb on + strand, within CA265_RS01335 at 336.316 kb on - strand, within CA265_RS01335 at 336.339 kb on - strand, within CA265_RS01335 at 336.344 kb on + strand, within CA265_RS01335 at 336.349 kb on + strand, within CA265_RS01335 at 336.407 kb on - strand, within CA265_RS01335 at 336.418 kb on - strand, within CA265_RS01335 at 336.466 kb on - strand, within CA265_RS01335 at 336.466 kb on - strand, within CA265_RS01335 at 336.500 kb on - strand, within CA265_RS01335 at 336.602 kb on - strand, within CA265_RS01335 at 336.639 kb on + strand, within CA265_RS01335 at 336.640 kb on - strand at 336.683 kb on + strand at 336.684 kb on - strand at 336.817 kb on + strand at 336.817 kb on + strand at 336.818 kb on - strand at 336.818 kb on - strand at 336.818 kb on - strand at 336.818 kb on - strand at 336.829 kb on + strand at 336.861 kb on + strand at 336.872 kb on + strand at 336.892 kb on + strand at 336.892 kb on + strand at 336.893 kb on - strand at 336.905 kb on + strand at 336.910 kb on + strand at 336.965 kb on + strand at 336.965 kb on + strand at 336.965 kb on + strand at 337.124 kb on - strand, within CA265_RS01340 at 337.175 kb on + strand, within CA265_RS01340 at 337.284 kb on + strand, within CA265_RS01340 at 337.298 kb on + strand, within CA265_RS01340 at 337.324 kb on + strand, within CA265_RS01340 at 337.402 kb on + strand, within CA265_RS01340 at 337.402 kb on + strand, within CA265_RS01340 at 337.617 kb on - strand, within CA265_RS01340 at 337.620 kb on + strand, within CA265_RS01340 at 337.663 kb on + strand, within CA265_RS01340 at 337.664 kb on - strand, within CA265_RS01340 at 337.688 kb on + strand, within CA265_RS01340 at 337.765 kb on - strand, within CA265_RS01340 at 337.809 kb on + strand, within CA265_RS01340 at 337.854 kb on + strand, within CA265_RS01340 at 337.863 kb on + strand, within CA265_RS01340 at 337.863 kb on + strand, within CA265_RS01340 at 337.864 kb on - strand, within CA265_RS01340 at 337.963 kb on + strand, within CA265_RS01340 at 337.972 kb on - strand, within CA265_RS01340 at 338.100 kb on + strand, within CA265_RS01340 at 338.130 kb on + strand, within CA265_RS01340 at 338.196 kb on + strand, within CA265_RS01340 at 338.196 kb on + strand, within CA265_RS01340 at 338.197 kb on - strand, within CA265_RS01340 at 338.220 kb on - strand, within CA265_RS01340 at 338.221 kb on + strand, within CA265_RS01340 at 338.225 kb on - strand, within CA265_RS01340 at 338.253 kb on + strand, within CA265_RS01340 at 338.295 kb on + strand, within CA265_RS01340 at 338.295 kb on + strand, within CA265_RS01340 at 338.296 kb on - strand, within CA265_RS01340 at 338.296 kb on - strand, within CA265_RS01340 at 338.296 kb on - strand, within CA265_RS01340 at 338.296 kb on - strand at 338.298 kb on - strand, within CA265_RS01340 at 338.394 kb on - strand, within CA265_RS01340 at 338.394 kb on - strand, within CA265_RS01340 at 338.501 kb on + strand at 338.506 kb on + strand at 338.561 kb on + strand at 338.561 kb on + strand at 338.562 kb on - strand at 338.656 kb on + strand at 338.677 kb on + strand at 338.677 kb on + strand at 338.726 kb on - strand at 338.740 kb on + strand at 338.749 kb on + strand at 338.761 kb on - strand at 338.864 kb on + strand, within CA265_RS01345 at 338.876 kb on + strand, within CA265_RS01345 at 338.904 kb on + strand, within CA265_RS01345 at 338.904 kb on + strand, within CA265_RS01345 at 338.905 kb on - strand, within CA265_RS01345 at 338.936 kb on - strand, within CA265_RS01345 at 339.082 kb on + strand, within CA265_RS01345 at 339.098 kb on - strand, within CA265_RS01345 at 339.160 kb on - strand, within CA265_RS01345 at 339.182 kb on - strand, within CA265_RS01345 at 339.226 kb on + strand, within CA265_RS01345 at 339.238 kb on + strand, within CA265_RS01345 at 339.239 kb on - strand, within CA265_RS01345 at 339.246 kb on + strand, within CA265_RS01345 at 339.271 kb on + strand, within CA265_RS01345 at 339.272 kb on - strand, within CA265_RS01345 at 339.276 kb on - strand, within CA265_RS01345 at 339.276 kb on - strand, within CA265_RS01345 at 339.277 kb on + strand, within CA265_RS01345 at 339.277 kb on + strand, within CA265_RS01345 at 339.349 kb on + strand, within CA265_RS01345 at 339.488 kb on - strand, within CA265_RS01345 at 339.490 kb on + strand, within CA265_RS01345 at 339.491 kb on - strand, within CA265_RS01345 at 339.580 kb on - strand, within CA265_RS01345
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 335,868 - CA265_RS01330 0.68 +0.0 335,878 + CA265_RS01330 0.69 -1.0 335,987 + CA265_RS01330 0.80 +0.1 336,014 - CA265_RS01330 0.82 -0.2 336,125 + -0.4 336,182 + +0.1 336,183 - +1.1 336,196 - -0.2 336,204 - -0.5 336,207 - -0.4 336,243 + -0.3 336,282 - CA265_RS01335 0.11 +1.3 336,282 - CA265_RS01335 0.11 +0.2 336,282 - CA265_RS01335 0.11 -0.8 336,282 - CA265_RS01335 0.11 +0.0 336,283 + CA265_RS01335 0.12 -0.3 336,283 + CA265_RS01335 0.12 +1.1 336,284 - CA265_RS01335 0.12 -0.1 336,315 + CA265_RS01335 0.19 -0.2 336,316 - CA265_RS01335 0.19 -0.5 336,339 - CA265_RS01335 0.24 -0.1 336,344 + CA265_RS01335 0.25 +0.3 336,349 + CA265_RS01335 0.26 -1.4 336,407 - CA265_RS01335 0.39 -0.4 336,418 - CA265_RS01335 0.41 -0.6 336,466 - CA265_RS01335 0.52 -0.7 336,466 - CA265_RS01335 0.52 +0.1 336,500 - CA265_RS01335 0.59 -1.0 336,602 - CA265_RS01335 0.82 +2.4 336,639 + CA265_RS01335 0.90 -0.2 336,640 - -0.2 336,683 + +1.4 336,684 - +0.4 336,817 + -0.1 336,817 + -0.5 336,818 - -0.3 336,818 - -0.2 336,818 - +0.1 336,818 - -0.9 336,829 + -0.1 336,861 + +0.5 336,872 + +1.3 336,892 + -0.1 336,892 + -0.5 336,893 - -0.5 336,905 + -0.8 336,910 + +0.3 336,965 + -0.3 336,965 + -0.1 336,965 + +1.0 337,124 - CA265_RS01340 0.16 +0.2 337,175 + CA265_RS01340 0.19 +0.3 337,284 + CA265_RS01340 0.25 +0.1 337,298 + CA265_RS01340 0.26 +0.1 337,324 + CA265_RS01340 0.28 +0.2 337,402 + CA265_RS01340 0.32 +0.3 337,402 + CA265_RS01340 0.32 +0.2 337,617 - CA265_RS01340 0.44 +0.5 337,620 + CA265_RS01340 0.44 +0.4 337,663 + CA265_RS01340 0.47 +0.3 337,664 - CA265_RS01340 0.47 -0.1 337,688 + CA265_RS01340 0.48 +0.9 337,765 - CA265_RS01340 0.52 -0.1 337,809 + CA265_RS01340 0.55 +0.0 337,854 + CA265_RS01340 0.57 -0.1 337,863 + CA265_RS01340 0.58 +0.7 337,863 + CA265_RS01340 0.58 -0.2 337,864 - CA265_RS01340 0.58 -0.4 337,963 + CA265_RS01340 0.63 -0.7 337,972 - CA265_RS01340 0.64 -0.8 338,100 + CA265_RS01340 0.71 +0.6 338,130 + CA265_RS01340 0.73 +0.1 338,196 + CA265_RS01340 0.76 -0.3 338,196 + CA265_RS01340 0.76 +0.9 338,197 - CA265_RS01340 0.77 +0.3 338,220 - CA265_RS01340 0.78 +1.4 338,221 + CA265_RS01340 0.78 +0.5 338,225 - CA265_RS01340 0.78 +0.1 338,253 + CA265_RS01340 0.80 +0.6 338,295 + CA265_RS01340 0.82 +0.7 338,295 + CA265_RS01340 0.82 +0.8 338,296 - CA265_RS01340 0.82 -0.0 338,296 - CA265_RS01340 0.82 -0.8 338,296 - CA265_RS01340 0.82 -0.8 338,296 - -0.3 338,298 - CA265_RS01340 0.82 +0.6 338,394 - CA265_RS01340 0.88 +0.1 338,394 - CA265_RS01340 0.88 +1.3 338,501 + -0.3 338,506 + +0.7 338,561 + +0.6 338,561 + +0.4 338,562 - +0.9 338,656 + -1.5 338,677 + +0.5 338,677 + +0.3 338,726 - +0.7 338,740 + -0.1 338,749 + +0.3 338,761 - -0.3 338,864 + CA265_RS01345 0.16 +0.6 338,876 + CA265_RS01345 0.17 +0.3 338,904 + CA265_RS01345 0.19 +0.7 338,904 + CA265_RS01345 0.19 +0.6 338,905 - CA265_RS01345 0.20 +0.6 338,936 - CA265_RS01345 0.22 -0.4 339,082 + CA265_RS01345 0.34 +0.1 339,098 - CA265_RS01345 0.36 -0.5 339,160 - CA265_RS01345 0.41 -0.4 339,182 - CA265_RS01345 0.43 -0.2 339,226 + CA265_RS01345 0.47 +0.4 339,238 + CA265_RS01345 0.48 -0.2 339,239 - CA265_RS01345 0.48 +1.8 339,246 + CA265_RS01345 0.48 -0.4 339,271 + CA265_RS01345 0.50 +0.0 339,272 - CA265_RS01345 0.50 +0.5 339,276 - CA265_RS01345 0.51 -0.1 339,276 - CA265_RS01345 0.51 +0.1 339,277 + CA265_RS01345 0.51 -0.2 339,277 + CA265_RS01345 0.51 -0.6 339,349 + CA265_RS01345 0.57 +0.3 339,488 - CA265_RS01345 0.69 +0.6 339,490 + CA265_RS01345 0.69 -0.7 339,491 - CA265_RS01345 0.69 -0.2 339,580 - CA265_RS01345 0.76 +0.2
Or see this region's nucleotide sequence