Experiment: 1-ethyl-3-methylimidazolium chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_20780 and AO356_20785 are separated by 156 nucleotides AO356_20785 and AO356_20790 are separated by 352 nucleotides
AO356_20780: AO356_20780 - diguanylate cyclase, at 4,630,595 to 4,632,784
_20780
AO356_20785: AO356_20785 - hypothetical protein, at 4,632,941 to 4,633,126
_20785
AO356_20790: AO356_20790 - hypothetical protein, at 4,633,479 to 4,633,895
_20790
Position (kb)
4632
4633
4634 Strain fitness (log2 ratio)
-2
-1
0
1 at 4631.987 kb on + strand, within AO356_20780 at 4631.987 kb on + strand, within AO356_20780 at 4631.987 kb on + strand, within AO356_20780 at 4631.987 kb on + strand, within AO356_20780 at 4631.988 kb on - strand, within AO356_20780 at 4631.988 kb on - strand, within AO356_20780 at 4631.988 kb on - strand, within AO356_20780 at 4631.988 kb on - strand, within AO356_20780 at 4632.344 kb on + strand, within AO356_20780 at 4632.345 kb on - strand, within AO356_20780 at 4632.728 kb on + strand at 4632.913 kb on + strand at 4632.954 kb on - strand at 4632.954 kb on - strand at 4633.016 kb on + strand, within AO356_20785 at 4633.017 kb on - strand, within AO356_20785 at 4633.183 kb on - strand at 4633.234 kb on + strand at 4633.239 kb on - strand at 4633.247 kb on + strand at 4633.293 kb on + strand at 4633.293 kb on + strand at 4633.293 kb on + strand at 4633.294 kb on - strand at 4633.294 kb on - strand at 4633.294 kb on - strand at 4633.294 kb on - strand at 4633.297 kb on + strand at 4633.297 kb on + strand at 4633.297 kb on + strand at 4633.297 kb on + strand at 4633.297 kb on + strand at 4633.298 kb on - strand at 4633.298 kb on - strand at 4633.325 kb on + strand at 4633.326 kb on - strand at 4633.326 kb on - strand at 4633.365 kb on + strand at 4633.366 kb on - strand at 4633.370 kb on + strand at 4633.417 kb on + strand at 4633.475 kb on + strand at 4633.475 kb on + strand at 4633.476 kb on - strand at 4633.504 kb on + strand at 4633.869 kb on + strand at 4633.869 kb on + strand at 4633.870 kb on - strand at 4633.870 kb on - strand at 4634.017 kb on + strand at 4634.017 kb on + strand at 4634.017 kb on + strand at 4634.017 kb on + strand at 4634.017 kb on + strand at 4634.018 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium chloride 200 mM remove 4,631,987 + AO356_20780 0.64 -1.0 4,631,987 + AO356_20780 0.64 -1.3 4,631,987 + AO356_20780 0.64 -2.0 4,631,987 + AO356_20780 0.64 +0.9 4,631,988 - AO356_20780 0.64 +1.4 4,631,988 - AO356_20780 0.64 +0.2 4,631,988 - AO356_20780 0.64 -0.4 4,631,988 - AO356_20780 0.64 -0.1 4,632,344 + AO356_20780 0.80 -1.5 4,632,345 - AO356_20780 0.80 -1.5 4,632,728 + -0.3 4,632,913 + -0.9 4,632,954 - +0.8 4,632,954 - +0.4 4,633,016 + AO356_20785 0.40 -2.0 4,633,017 - AO356_20785 0.41 -0.2 4,633,183 - +1.2 4,633,234 + +0.1 4,633,239 - +0.6 4,633,247 + -0.2 4,633,293 + -0.1 4,633,293 + +0.0 4,633,293 + +0.5 4,633,294 - -0.5 4,633,294 - -2.2 4,633,294 - +0.2 4,633,294 - -0.3 4,633,297 + +1.6 4,633,297 + +0.6 4,633,297 + -0.4 4,633,297 + -0.0 4,633,297 + +0.2 4,633,298 - -0.8 4,633,298 - -0.2 4,633,325 + +0.6 4,633,326 - +1.6 4,633,326 - -1.2 4,633,365 + +0.6 4,633,366 - +1.1 4,633,370 + -1.5 4,633,417 + +0.4 4,633,475 + +0.0 4,633,475 + +1.0 4,633,476 - +0.5 4,633,504 + -1.7 4,633,869 + +0.8 4,633,869 + -0.9 4,633,870 - -1.2 4,633,870 - +1.0 4,634,017 + -2.0 4,634,017 + +0.9 4,634,017 + -1.0 4,634,017 + +0.2 4,634,017 + +1.5 4,634,018 - -2.2
Or see this region's nucleotide sequence