Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_17640

Experiment: 1-ethyl-3-methylimidazolium chloride 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 200 mM
3,974,284	-		AO356_17635	0.25	+0.8
3,974,355	-		AO356_17635	0.31	-0.0
3,974,435	-		AO356_17635	0.37	-0.7
3,974,478	+		AO356_17635	0.41	+0.1
3,974,478	+		AO356_17635	0.41	+0.5
3,974,573	+		AO356_17635	0.48	+0.0
3,974,573	+		AO356_17635	0.48	-0.3
3,974,573	+		AO356_17635	0.48	-1.1
3,974,573	+		AO356_17635	0.48	+0.4
3,974,573	+		AO356_17635	0.48	+1.5
3,974,574	-		AO356_17635	0.49	-0.8
3,974,574	-		AO356_17635	0.49	-1.3
3,974,574	-		AO356_17635	0.49	-0.6
3,974,574	-		AO356_17635	0.49	+1.2
3,974,577	+		AO356_17635	0.49	+1.3
3,974,577	+		AO356_17635	0.49	+1.3
3,974,577	+		AO356_17635	0.49	+0.7
3,974,578	-		AO356_17635	0.49	-1.5
3,974,578	-		AO356_17635	0.49	+1.4
3,974,578	-		AO356_17635	0.49	-0.3
3,974,578	-		AO356_17635	0.49	-2.0
3,974,578	-		AO356_17635	0.49	+0.8
3,974,594	+		AO356_17635	0.50	+1.1
3,974,595	-		AO356_17635	0.50	+1.4
3,974,605	+		AO356_17635	0.51	-1.7
3,974,639	+		AO356_17635	0.54	-1.3
3,974,640	-		AO356_17635	0.54	-1.6
3,974,657	+		AO356_17635	0.55	-3.1
3,974,658	-		AO356_17635	0.55	+0.4
3,974,658	-		AO356_17635	0.55	-2.4
3,974,658	-		AO356_17635	0.55	+1.5
3,974,658	-		AO356_17635	0.55	+1.9
3,974,658	-		AO356_17635	0.55	+1.3
3,974,875	+		AO356_17635	0.73	+0.1
3,974,875	+		AO356_17635	0.73	+0.3
3,974,875	+		AO356_17635	0.73	-1.4
3,974,876	-		AO356_17635	0.73	+0.1
3,974,876	-		AO356_17635	0.73	-0.0
3,974,876	-		AO356_17635	0.73	-0.4
3,974,932	+		AO356_17635	0.77	-1.1
3,974,933	-		AO356_17635	0.77	+0.8
3,974,933	-		AO356_17635	0.77	+0.1
3,975,087	+		AO356_17635	0.90	-0.3
3,975,087	+		AO356_17635	0.90	-0.3
3,975,087	+		AO356_17635	0.90	-0.4
3,975,087	+		AO356_17635	0.90	-0.1
3,975,087	+		AO356_17635	0.90	-1.1
3,975,087	+		AO356_17635	0.90	-2.6
3,975,087	+		AO356_17635	0.90	-0.3
3,975,087	+		AO356_17635	0.90	-0.4
3,975,087	+		AO356_17635	0.90	-2.5
3,975,087	+		AO356_17635	0.90	-1.3
3,975,087	+		AO356_17635	0.90	-2.7
3,975,087	+		AO356_17635	0.90	+0.4
3,975,087	+		AO356_17635	0.90	-1.8
3,975,088	-		AO356_17635	0.90	+1.4
3,975,088	-		AO356_17635	0.90	-0.7
3,975,088	-		AO356_17635	0.90	+0.9
3,975,088	-		AO356_17635	0.90	+0.3
3,975,088	-		AO356_17635	0.90	-1.3
3,975,088	-		AO356_17635	0.90	-0.3
3,975,088	-		AO356_17635	0.90	+0.1
3,975,088	-		AO356_17635	0.90	-2.2
3,975,088	-		AO356_17635	0.90	-2.4
3,975,088	-		AO356_17635	0.90	-0.1
3,975,088	-		AO356_17635	0.90	+0.8
3,975,088	-		AO356_17635	0.90	+0.4
3,975,088	-		AO356_17635	0.90	+0.2
3,975,088	-		AO356_17635	0.90	+0.4
3,975,088	-		AO356_17635	0.90	-0.5
3,975,088	-		AO356_17635	0.90	+1.8
3,975,088	-		AO356_17635	0.90	-1.1
3,975,088	-		AO356_17635	0.90	+0.4
3,975,089	+		AO356_17635	0.90	-1.3
3,975,089	+		AO356_17635	0.90	-1.1
3,975,089	+		AO356_17635	0.90	-1.9
3,975,089	+		AO356_17635	0.90	-2.5
3,975,089	+		AO356_17635	0.90	-1.6
3,975,089	+		AO356_17635	0.90	-0.7
3,975,089	+		AO356_17635	0.90	+0.8
3,975,089	+		AO356_17635	0.90	-1.0
3,975,089	+		AO356_17635	0.90	-0.6
3,975,090	-				-2.5
3,975,090	-				+1.5
3,975,090	-				-3.1
3,975,090	-				+0.2
3,975,090	-				+0.3
3,975,090	-				-1.6
3,975,090	-				+0.6
3,975,090	-				+0.4
3,975,090	-				+1.4
3,975,090	-				-0.6
3,975,090	-				+0.7
3,975,174	-				+0.2
3,975,174	-				-0.1
3,975,176	-				+0.4
3,975,212	+				+1.0
3,975,258	+				+1.0
3,975,258	+				-0.5
3,975,258	+				-0.1
3,975,259	-				-1.2
3,975,259	-				-2.4
3,975,259	-				-2.5
3,975,259	-				+1.0
3,975,259	-				+0.2
3,975,259	-				-0.7
3,975,272	-				-0.1
3,975,272	-				+0.3
3,975,404	+		AO356_17640	0.11	+1.0
3,975,445	+		AO356_17640	0.15	-0.1
3,975,446	-		AO356_17640	0.15	-0.6
3,975,470	+		AO356_17640	0.17	+1.0
3,975,470	+		AO356_17640	0.17	-1.6
3,975,470	+		AO356_17640	0.17	+1.4
3,975,471	-		AO356_17640	0.17	-1.7
3,975,485	+		AO356_17640	0.18	-1.4
3,975,486	-		AO356_17640	0.18	+2.0
3,975,486	-		AO356_17640	0.18	+2.0
3,975,486	-		AO356_17640	0.18	-1.1
3,975,697	+		AO356_17640	0.35	+0.4
3,975,697	+		AO356_17640	0.35	-1.9
3,975,697	+		AO356_17640	0.35	+1.4
3,975,698	-		AO356_17640	0.35	+0.1
3,975,698	-		AO356_17640	0.35	-0.3
3,975,698	-		AO356_17640	0.35	-0.7
3,975,739	-		AO356_17640	0.38	-1.8
3,975,739	-		AO356_17640	0.38	+1.4
3,975,761	+		AO356_17640	0.40	+2.5
3,975,778	-		AO356_17640	0.41	-0.3
3,975,788	+		AO356_17640	0.42	-0.2
3,975,788	+		AO356_17640	0.42	-0.2
3,975,788	+		AO356_17640	0.42	-0.4
3,975,789	-		AO356_17640	0.42	-0.2
3,975,789	-		AO356_17640	0.42	-1.2
3,975,789	-		AO356_17640	0.42	+2.4
3,975,789	-		AO356_17640	0.42	-0.1
3,975,789	-		AO356_17640	0.42	-0.8
3,975,789	-		AO356_17640	0.42	-0.0
3,975,789	-		AO356_17640	0.42	+1.3
3,975,789	-		AO356_17640	0.42	-0.4
3,975,789	-		AO356_17640	0.42	+0.2
3,975,792	+		AO356_17640	0.43	+1.4
3,975,792	+		AO356_17640	0.43	+1.0
3,975,793	-		AO356_17640	0.43	-0.1
3,975,793	-		AO356_17640	0.43	+0.5
3,975,793	-		AO356_17640	0.43	+1.1
3,975,793	-		AO356_17640	0.43	+1.0
3,975,793	-		AO356_17640	0.43	+0.1
3,975,846	+		AO356_17640	0.47	+0.4
3,975,846	+		AO356_17640	0.47	+0.9
3,975,846	+		AO356_17640	0.47	+1.8
3,975,846	+		AO356_17640	0.47	+0.5
3,975,846	+		AO356_17640	0.47	-1.6
3,975,846	+		AO356_17640	0.47	+0.6
3,975,847	-		AO356_17640	0.47	-0.6
3,975,889	-		AO356_17640	0.50	+1.0
3,975,931	+		AO356_17640	0.54	+1.4
3,975,931	+		AO356_17640	0.54	-1.1
3,975,931	+		AO356_17640	0.54	+0.4
3,975,931	+		AO356_17640	0.54	+0.6
3,975,931	+		AO356_17640	0.54	-0.7
3,975,931	+		AO356_17640	0.54	-2.1
3,975,932	-		AO356_17640	0.54	+1.1
3,975,932	-		AO356_17640	0.54	-1.7
3,975,932	-		AO356_17640	0.54	-0.3
3,975,932	-		AO356_17640	0.54	+0.8
3,975,932	-		AO356_17640	0.54	+0.4
3,975,932	-		AO356_17640	0.54	-1.7
3,975,932	-		AO356_17640	0.54	+0.2
3,975,932	-		AO356_17640	0.54	+0.3
3,975,932	-		AO356_17640	0.54	-1.6
3,975,932	-		AO356_17640	0.54	+0.4
3,975,933	+		AO356_17640	0.54	-2.0
3,975,933	+		AO356_17640	0.54	-2.2
3,975,933	+		AO356_17640	0.54	-1.6
3,975,933	+		AO356_17640	0.54	-0.6
3,975,933	+		AO356_17640	0.54	-0.2
3,975,933	+		AO356_17640	0.54	+0.5
3,975,934	-		AO356_17640	0.54	-1.9
3,975,934	-		AO356_17640	0.54	+0.4
3,975,934	-		AO356_17640	0.54	-0.2
3,975,934	-		AO356_17640	0.54	+0.3
3,975,934	-		AO356_17640	0.54	-0.5
3,975,935	+		AO356_17640	0.54	+1.1
3,975,935	+		AO356_17640	0.54	+0.4
3,975,935	+		AO356_17640	0.54	-1.9
3,975,936	-		AO356_17640	0.54	+1.1
3,975,936	-		AO356_17640	0.54	-0.3
3,975,936	-		AO356_17640	0.54	+0.5
3,975,951	+		AO356_17640	0.55	+0.3
3,975,951	+		AO356_17640	0.55	-1.3
3,975,952	-		AO356_17640	0.55	+0.6
3,975,952	-		AO356_17640	0.55	-0.3
3,975,952	-		AO356_17640	0.55	-1.7
3,976,057	+		AO356_17640	0.64	+1.3
3,976,057	+		AO356_17640	0.64	-0.6
3,976,057	+		AO356_17640	0.64	-0.9
3,976,058	-		AO356_17640	0.64	-1.1
3,976,058	-		AO356_17640	0.64	+1.2
3,976,058	-		AO356_17640	0.64	+0.5
3,976,063	+		AO356_17640	0.64	+0.4
3,976,063	+		AO356_17640	0.64	+0.3
3,976,063	+		AO356_17640	0.64	-0.4
3,976,063	+		AO356_17640	0.64	-1.3
3,976,063	+		AO356_17640	0.64	-0.5
3,976,064	-		AO356_17640	0.64	-0.0
3,976,169	+		AO356_17640	0.73	-1.1
3,976,226	+		AO356_17640	0.77	-1.7
3,976,227	-		AO356_17640	0.77	+1.0
3,976,384	-				+0.5
3,976,384	-				-2.1
3,976,384	-				-0.2
3,976,384	-				+2.2
3,976,384	-				+0.1
3,976,467	+				-2.1
3,976,578	+				-0.4
3,976,578	+				-0.4
3,976,578	+				-0.5
3,976,578	+				-1.0
3,976,578	+				-1.2
3,976,578	+				+1.2
3,976,578	+				+3.5
3,976,579	-				-0.9
3,976,579	-				+0.3
3,976,579	-				-0.8
3,976,579	-				+1.6
3,976,579	-				-1.2
3,976,579	-				+1.6
3,976,598	+				-1.3
3,976,598	+				+0.9
3,976,599	-				-1.6
3,976,599	-				+0.7
3,976,599	-				+0.8
3,976,599	-				+0.4
3,976,599	-				+0.4
3,976,599	-				+0.1
3,976,652	+		AO356_17645	0.11	+2.8
3,976,652	+		AO356_17645	0.11	-1.7
3,976,652	+		AO356_17645	0.11	+0.7
3,976,653	-		AO356_17645	0.11	+0.7
3,976,653	-		AO356_17645	0.11	+2.3
3,976,682	+		AO356_17645	0.15	-1.0
3,976,682	+		AO356_17645	0.15	-0.3
3,976,682	+		AO356_17645	0.15	+0.3
3,976,682	+		AO356_17645	0.15	-1.6
3,976,682	+		AO356_17645	0.15	+1.6
3,976,682	+		AO356_17645	0.15	+0.2
3,976,682	+		AO356_17645	0.15	-0.3
3,976,682	+		AO356_17645	0.15	+0.8
3,976,682	+		AO356_17645	0.15	+0.4
3,976,683	-		AO356_17645	0.15	+1.2
3,976,683	-		AO356_17645	0.15	-1.4
3,976,683	-		AO356_17645	0.15	+1.1
3,976,683	-		AO356_17645	0.15	+0.4
3,976,683	-		AO356_17645	0.15	+0.4
3,976,683	-		AO356_17645	0.15	+0.3
3,976,747	+		AO356_17645	0.24	-2.6
3,976,747	+		AO356_17645	0.24	+0.0
3,976,748	-		AO356_17645	0.24	+0.1
3,976,748	-		AO356_17645	0.24	-0.4
3,976,748	-		AO356_17645	0.24	-0.5
3,976,748	-		AO356_17645	0.24	-1.2
3,976,748	-		AO356_17645	0.24	+0.8
3,976,748	-		AO356_17645	0.24	+0.2
3,976,748	-		AO356_17645	0.24	-0.6
3,976,751	+		AO356_17645	0.25	+0.2
3,976,751	+		AO356_17645	0.25	-0.4
3,976,751	+		AO356_17645	0.25	+0.8
3,976,751	+		AO356_17645	0.25	-1.4
3,976,751	+		AO356_17645	0.25	+0.4
3,976,751	+		AO356_17645	0.25	+2.0
3,976,751	+		AO356_17645	0.25	-3.3
3,976,751	+		AO356_17645	0.25	+1.4
3,976,752	-		AO356_17645	0.25	-0.1
3,976,752	-		AO356_17645	0.25	+0.4
3,976,752	-		AO356_17645	0.25	+0.2
3,976,752	-		AO356_17645	0.25	+0.9
3,976,752	-		AO356_17645	0.25	+0.5
3,976,752	-		AO356_17645	0.25	-0.1
3,976,752	-		AO356_17645	0.25	-1.3
3,976,752	-		AO356_17645	0.25	-0.3
3,976,753	+		AO356_17645	0.25	+1.2
3,976,769	+		AO356_17645	0.27	+0.9
3,976,769	+		AO356_17645	0.27	-0.6
3,976,770	-		AO356_17645	0.27	-1.4
3,976,910	+		AO356_17645	0.46	-2.1
3,976,910	+		AO356_17645	0.46	-2.6
3,976,911	-		AO356_17645	0.46	-0.5
3,976,911	-		AO356_17645	0.46	+0.1
3,976,988	+		AO356_17645	0.56	+0.3
3,976,988	+		AO356_17645	0.56	-3.1
3,976,988	+		AO356_17645	0.56	+1.5
3,976,989	-		AO356_17645	0.57	+0.7
3,976,989	-		AO356_17645	0.57	+1.3
3,976,989	-		AO356_17645	0.57	+1.7
3,977,112	+		AO356_17645	0.73	-0.7
3,977,112	+		AO356_17645	0.73	+1.7
3,977,112	+		AO356_17645	0.73	-0.5
3,977,113	-		AO356_17645	0.73	+1.7
3,977,113	-		AO356_17645	0.73	+1.4
3,977,349	-				-1.0
3,977,349	-				+1.3
3,977,349	-				+1.3
3,977,356	+				-0.3
3,977,356	+				-2.1
3,977,356	+				-0.4
3,977,357	-				-1.6
3,977,357	-				-0.8
3,977,357	-				+0.1
3,977,357	-				+1.7
3,977,373	+				+1.5
3,977,374	-				+0.1
3,977,398	+				-0.1
3,977,398	+				+1.4
3,977,398	+				+0.1
3,977,398	+				+0.6
3,977,399	-				-0.0
3,977,399	-				-2.3
3,977,453	+		AO356_17650	0.20	-1.1
3,977,453	+		AO356_17650	0.20	+1.8
3,977,453	+		AO356_17650	0.20	-1.9
3,977,454	-		AO356_17650	0.20	+1.2
3,977,454	-		AO356_17650	0.20	-2.1
3,977,454	-		AO356_17650	0.20	+1.2