Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16025

Experiment: 1-ethyl-3-methylimidazolium chloride 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 200 mM
3,620,951	+				+0.6
3,620,951	+				+0.6
3,620,952	-				-1.2
3,620,952	-				-1.3
3,621,064	+				+2.3
3,621,064	+				+0.1
3,621,064	+				+1.3
3,621,064	+				-0.9
3,621,064	+				-0.4
3,621,064	+				+2.1
3,621,064	+				-4.0
3,621,064	+				+3.1
3,621,064	+				-0.1
3,621,064	+				-0.4
3,621,065	-				+0.5
3,621,065	-				+0.0
3,621,065	-				+1.4
3,621,065	-				-0.2
3,621,065	-				-0.1
3,621,065	-				+0.8
3,621,065	-				-0.7
3,621,065	-				+0.7
3,621,065	-				-0.0
3,621,065	-				+0.6
3,621,066	+				+1.6
3,621,066	+				-2.2
3,621,066	+				-0.0
3,621,066	+				+1.0
3,621,067	-				-1.8
3,621,067	-				-2.1
3,621,067	-				-0.5
3,621,067	-				+1.1
3,621,071	+				+0.9
3,621,071	+				+1.7
3,621,072	-				+0.5
3,621,072	-				-0.6
3,621,123	+				+0.1
3,621,123	+				+2.3
3,621,124	-				+0.7
3,621,140	+				+0.7
3,621,141	-				+1.1
3,621,141	-				-1.4
3,621,173	+				-0.5
3,621,256	+				+1.0
3,621,256	+				-0.4
3,621,256	+				+0.7
3,621,256	+				-0.1
3,621,256	+				+1.9
3,621,256	+				+0.2
3,621,257	-				-0.0
3,621,257	-				-0.5
3,621,257	-				+0.7
3,621,257	-				-1.0
3,621,257	-				+0.3
3,621,257	-				+0.5
3,621,257	-				+1.4
3,621,262	+				+1.9
3,621,262	+				-2.2
3,621,263	-				+0.2
3,621,263	-				+0.6
3,621,263	-				+0.5
3,621,263	-				-0.9
3,621,277	+				+1.5
3,621,277	+				-0.3
3,621,278	-				-1.7
3,621,345	-		AO356_16020	0.21	-1.5
3,621,353	+		AO356_16020	0.23	+2.1
3,621,353	+		AO356_16020	0.23	+1.1
3,621,354	-		AO356_16020	0.24	-0.2
3,621,354	-		AO356_16020	0.24	-1.0
3,621,408	+		AO356_16020	0.37	+0.3
3,621,409	-		AO356_16020	0.37	+0.9
3,621,409	-		AO356_16020	0.37	-0.3
3,621,413	+		AO356_16020	0.38	-0.5
3,621,413	+		AO356_16020	0.38	-1.2
3,621,414	-		AO356_16020	0.38	+0.9
3,621,475	+		AO356_16020	0.53	+0.8
3,621,475	+		AO356_16020	0.53	-0.5
3,621,476	-		AO356_16020	0.53	-1.2
3,621,476	-		AO356_16020	0.53	+1.1
3,621,476	-		AO356_16020	0.53	-0.8
3,621,476	-		AO356_16020	0.53	-1.4
3,621,476	-		AO356_16020	0.53	+0.3
3,621,476	-		AO356_16020	0.53	-0.9
3,621,476	-		AO356_16020	0.53	-0.2
3,621,538	+		AO356_16020	0.68	+0.1
3,621,539	-		AO356_16020	0.69	+0.0
3,621,622	+		AO356_16020	0.89	-1.6
3,621,622	+		AO356_16020	0.89	-0.7
3,621,622	+		AO356_16020	0.89	-1.2
3,621,623	-		AO356_16020	0.89	-1.0
3,621,623	-		AO356_16020	0.89	-2.3
3,621,623	-		AO356_16020	0.89	+0.1
3,621,623	-		AO356_16020	0.89	-1.0
3,621,623	-		AO356_16020	0.89	-1.6
3,621,706	-				-1.0
3,621,730	-				+1.1
3,621,730	-				-1.5
3,621,839	-				+0.1
3,621,873	-				-0.7
3,621,929	+				-0.2
3,621,930	-				+0.9
3,621,930	-				+0.8
3,621,930	-				+1.2
3,621,935	+				-0.3
3,621,935	+				-2.4
3,621,935	+				-0.5
3,621,936	-				+0.6
3,621,936	-				-0.1
3,621,950	+				+0.8
3,621,950	+				+0.5
3,622,031	+		AO356_16025	0.27	+2.3
3,622,031	+		AO356_16025	0.27	-0.4
3,622,031	+		AO356_16025	0.27	-1.3
3,622,031	+		AO356_16025	0.27	+0.5
3,622,031	+		AO356_16025	0.27	+0.4
3,622,031	+		AO356_16025	0.27	+0.7
3,622,032	-		AO356_16025	0.27	+0.6
3,622,032	-		AO356_16025	0.27	+0.7
3,622,032	-		AO356_16025	0.27	-1.9
3,622,032	-		AO356_16025	0.27	+0.4
3,622,032	-		AO356_16025	0.27	-0.0
3,622,032	-		AO356_16025	0.27	-1.5
3,622,032	-		AO356_16025	0.27	-1.3
3,622,032	-		AO356_16025	0.27	+0.8
3,622,261	+				+0.4
3,622,262	-				+0.7
3,622,287	+				+2.3
3,622,288	-				+1.2
3,622,293	+				-1.8
3,622,293	+				+0.5
3,622,293	+				+0.9
3,622,294	-				-0.2
3,622,294	-				-1.2
3,622,343	+				-0.5
3,622,343	+				+0.5
3,622,343	+				+0.8
3,622,343	+				+0.9
3,622,344	-				+0.9
3,622,344	-				-0.7
3,622,396	+				+0.4
3,622,397	-				+1.0
3,622,431	+				-1.8
3,622,431	+				+0.8
3,622,431	+				+0.3
3,622,432	-				+0.2
3,622,432	-				-1.2
3,622,675	+		AO356_16030	0.19	-2.0
3,622,675	+		AO356_16030	0.19	-2.4
3,622,675	+		AO356_16030	0.19	-1.0
3,622,676	-		AO356_16030	0.19	+0.4
3,622,676	-		AO356_16030	0.19	-2.2
3,622,676	-		AO356_16030	0.19	-0.4
3,622,676	-		AO356_16030	0.19	-0.5
3,622,681	+		AO356_16030	0.21	+1.0
3,622,681	+		AO356_16030	0.21	+0.8
3,622,681	+		AO356_16030	0.21	+0.4
3,622,681	+		AO356_16030	0.21	-0.9
3,622,681	+		AO356_16030	0.21	-0.5
3,622,681	+		AO356_16030	0.21	-1.5
3,622,681	+		AO356_16030	0.21	-2.2
3,622,681	+		AO356_16030	0.21	+0.4
3,622,681	+		AO356_16030	0.21	-0.4
3,622,681	+		AO356_16030	0.21	-2.1
3,622,681	+		AO356_16030	0.21	+0.5
3,622,681	+		AO356_16030	0.21	+1.6
3,622,681	+		AO356_16030	0.21	+0.2
3,622,681	+		AO356_16030	0.21	-1.2
3,622,681	+		AO356_16030	0.21	+0.6
3,622,682	-		AO356_16030	0.21	-0.3
3,622,682	-		AO356_16030	0.21	+1.0
3,622,682	-		AO356_16030	0.21	+0.1
3,622,682	-		AO356_16030	0.21	+0.7
3,622,682	-		AO356_16030	0.21	-1.9
3,622,682	-		AO356_16030	0.21	-1.2
3,622,682	-		AO356_16030	0.21	+1.1
3,622,682	-		AO356_16030	0.21	+2.2
3,622,682	-		AO356_16030	0.21	+1.0
3,622,682	-		AO356_16030	0.21	-0.2
3,622,702	+		AO356_16030	0.28	+0.5
3,622,703	-		AO356_16030	0.28	+0.7
3,622,703	-		AO356_16030	0.28	+1.0
3,622,703	-		AO356_16030	0.28	+1.0
3,622,723	+		AO356_16030	0.35	+1.7
3,622,753	+		AO356_16030	0.45	-0.8
3,622,884	+		AO356_16030	0.89	-2.4
3,622,884	+		AO356_16030	0.89	+0.8
3,622,884	+		AO356_16030	0.89	-0.6
3,622,884	+		AO356_16030	0.89	+0.5
3,622,885	-		AO356_16030	0.89	+0.2
3,622,885	-		AO356_16030	0.89	-0.8
3,622,885	-		AO356_16030	0.89	+1.9
3,622,885	-		AO356_16030	0.89	-0.5
3,622,885	-		AO356_16030	0.89	-1.6
3,622,904	-				+0.6
3,622,904	-				-0.7
3,622,994	+				+0.6
3,622,995	-				-1.1
3,623,078	-				+0.7
3,623,078	-				+0.7
3,623,078	-				+0.7
3,623,078	-				+0.9
3,623,078	-				-0.8
3,623,078	-				-1.2
3,623,078	-				+1.0
3,623,078	-				-0.0
3,623,078	-				-1.3
3,623,078	-				+1.0
3,623,142	+				+1.4
3,623,192	+				+1.3
3,623,193	-				-1.3
3,623,193	-				+0.3
3,623,237	-		AO356_16035	0.11	+0.1
3,623,237	-		AO356_16035	0.11	-0.0
3,623,257	+		AO356_16035	0.12	+1.1
3,623,289	-		AO356_16035	0.13	-0.8
3,623,289	-		AO356_16035	0.13	-0.0
3,623,289	-		AO356_16035	0.13	-3.1
3,623,289	-		AO356_16035	0.13	-0.0