Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_13930

Experiment: 1-ethyl-3-methylimidazolium chloride 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 200 mM
3,159,032	+				-2.7
3,159,087	+				-1.0
3,159,087	+				+1.8
3,159,174	+				+1.5
3,159,270	-				+0.5
3,159,311	+				+0.9
3,159,348	-				-2.8
3,159,348	-				+0.2
3,159,365	+				+0.5
3,159,412	-				+0.1
3,159,412	-				+0.8
3,159,519	-				-1.4
3,159,526	+				+1.1
3,159,527	-				-0.2
3,159,527	-				-0.5
3,159,527	-				+0.2
3,159,697	-				-1.0
3,159,697	-				-0.8
3,159,737	+				-0.3
3,159,737	+				-0.3
3,159,737	+				+0.1
3,159,737	+				+1.1
3,159,737	+				-0.5
3,159,738	-				+0.1
3,159,738	-				-0.7
3,159,738	-				-1.7
3,159,739	+				-0.2
3,159,739	+				+1.1
3,159,739	+				+0.7
3,159,740	-				-0.1
3,159,740	-				-0.5
3,159,740	-				+0.4
3,159,740	-				-0.6
3,159,761	+				-2.1
3,159,761	+				-0.7
3,159,761	+				-2.6
3,159,761	+				-1.7
3,159,762	-				+1.1
3,159,762	-				+1.1
3,159,762	-				+0.3
3,159,902	+				-0.4
3,159,915	+				-0.9
3,159,916	-				+0.7
3,159,916	-				-0.4
3,160,032	+				-0.1
3,160,092	-				+0.3
3,160,282	-		AO356_13930	0.12	-2.4
3,160,374	+		AO356_13930	0.15	+0.3
3,160,375	-		AO356_13930	0.15	-1.4
3,160,375	-		AO356_13930	0.15	-0.2
3,160,398	+		AO356_13930	0.15	+1.7
3,160,398	+		AO356_13930	0.15	+1.6
3,160,399	-		AO356_13930	0.15	-1.5
3,160,506	-		AO356_13930	0.18	-0.1
3,160,506	-		AO356_13930	0.18	+1.9
3,160,539	+		AO356_13930	0.19	+1.4
3,160,540	-		AO356_13930	0.19	-0.8
3,160,540	-		AO356_13930	0.19	+0.7
3,160,540	-		AO356_13930	0.19	+1.5
3,160,638	+		AO356_13930	0.22	-2.2
3,161,070	+		AO356_13930	0.35	-0.7
3,161,070	+		AO356_13930	0.35	-1.7
3,161,071	-		AO356_13930	0.35	+0.5
3,161,110	-		AO356_13930	0.36	+1.7
3,161,110	-		AO356_13930	0.36	+0.8
3,161,110	-		AO356_13930	0.36	-0.7
3,161,113	-		AO356_13930	0.36	-0.4
3,161,139	+		AO356_13930	0.37	-1.0
3,161,140	-		AO356_13930	0.37	+0.3
3,161,454	+		AO356_13930	0.46	+0.3
3,161,454	+		AO356_13930	0.46	-0.2
3,161,455	-		AO356_13930	0.46	-1.1
3,161,455	-		AO356_13930	0.46	-1.4
3,161,652	+		AO356_13930	0.52	+1.5
3,161,653	-		AO356_13930	0.52	+0.7
3,161,653	-		AO356_13930	0.52	+0.2
3,161,895	+		AO356_13930	0.59	-1.4
3,161,929	-		AO356_13930	0.60	-0.5
3,161,964	+		AO356_13930	0.61	+0.7
3,161,967	+		AO356_13930	0.61	-1.1
3,161,967	+		AO356_13930	0.61	-0.3
3,161,967	+		AO356_13930	0.61	-0.2
3,161,967	+		AO356_13930	0.61	+0.2
3,161,968	-		AO356_13930	0.61	-0.4
3,161,968	-		AO356_13930	0.61	-1.2
3,161,968	-		AO356_13930	0.61	+2.3
3,161,968	-		AO356_13930	0.61	+0.3
3,162,015	-		AO356_13930	0.62	-0.1
3,162,015	-		AO356_13930	0.62	+0.9
3,162,015	-		AO356_13930	0.62	-0.6
3,162,039	+		AO356_13930	0.63	+0.7
3,162,039	+		AO356_13930	0.63	+0.0
3,162,039	+		AO356_13930	0.63	-0.8
3,162,040	-		AO356_13930	0.63	-0.5
3,162,040	-		AO356_13930	0.63	-0.5
3,162,040	-		AO356_13930	0.63	-1.1
3,162,040	-		AO356_13930	0.63	-3.0
3,162,137	+		AO356_13930	0.66	-0.6
3,162,137	+		AO356_13930	0.66	+0.6
3,162,137	+		AO356_13930	0.66	-1.4
3,162,138	-		AO356_13930	0.66	-0.5
3,162,228	+		AO356_13930	0.68	+0.3
3,162,256	-		AO356_13930	0.69	+0.5
3,162,256	-		AO356_13930	0.69	+1.0
3,162,256	-		AO356_13930	0.69	-0.1
3,162,256	-		AO356_13930	0.69	+0.6
3,162,256	-		AO356_13930	0.69	+0.0
3,162,256	-		AO356_13930	0.69	+0.9
3,162,462	+		AO356_13930	0.75	+0.4
3,162,462	+		AO356_13930	0.75	-0.5
3,162,480	+		AO356_13930	0.75	-1.9
3,162,480	+		AO356_13930	0.75	+0.9
3,162,480	+		AO356_13930	0.75	-0.3
3,162,480	+		AO356_13930	0.75	+0.8
3,162,480	+		AO356_13930	0.75	-0.7
3,162,481	-		AO356_13930	0.76	+1.5
3,162,481	-		AO356_13930	0.76	-0.3
3,162,512	+		AO356_13930	0.76	-0.7
3,162,512	+		AO356_13930	0.76	-0.2
3,162,512	+		AO356_13930	0.76	-0.2
3,162,512	+		AO356_13930	0.76	+0.2
3,162,564	+		AO356_13930	0.78	-1.1
3,162,564	+		AO356_13930	0.78	+0.3
3,162,564	+		AO356_13930	0.78	-1.3
3,162,564	+		AO356_13930	0.78	+0.3
3,162,565	-		AO356_13930	0.78	-0.6
3,162,847	-		AO356_13930	0.86	+1.8
3,162,847	-		AO356_13930	0.86	+0.1
3,162,868	-		AO356_13930	0.87	+2.3
3,162,891	+		AO356_13930	0.87	-0.7
3,162,892	-		AO356_13930	0.87	+0.7
3,162,930	+		AO356_13930	0.89	+1.2
3,162,930	+		AO356_13930	0.89	-0.6
3,162,930	+		AO356_13930	0.89	-0.6
3,162,930	+		AO356_13930	0.89	-0.8
3,162,930	+		AO356_13930	0.89	-2.6
3,162,930	+		AO356_13930	0.89	-0.5
3,162,930	+		AO356_13930	0.89	+1.4
3,162,930	+		AO356_13930	0.89	+2.1
3,162,930	+		AO356_13930	0.89	+0.3
3,162,930	+		AO356_13930	0.89	+1.4
3,162,931	-		AO356_13930	0.89	-2.0
3,162,931	-		AO356_13930	0.89	+0.9
3,162,931	-		AO356_13930	0.89	-3.0
3,162,931	-		AO356_13930	0.89	+2.0
3,162,931	-		AO356_13930	0.89	-1.0
3,162,931	-		AO356_13930	0.89	+0.1
3,162,931	-		AO356_13930	0.89	+1.9
3,162,931	-		AO356_13930	0.89	+1.9
3,162,931	-		AO356_13930	0.89	-0.2
3,162,931	-		AO356_13930	0.89	-0.1
3,162,931	-		AO356_13930	0.89	+0.7
3,162,931	-		AO356_13930	0.89	-1.5
3,162,942	+		AO356_13930	0.89	-1.3
3,163,080	+				-0.7
3,163,080	+				+0.4
3,163,080	+				+0.0
3,163,080	+				-1.2
3,163,080	+				-0.0
3,163,080	+				-1.1
3,163,081	-				+0.6
3,163,081	-				+0.4
3,163,081	-				+1.3
3,163,146	+				+1.0
3,163,146	+				+0.1
3,163,147	-				+0.4
3,163,147	-				+0.6
3,163,147	-				-0.5
3,163,147	-				+0.9
3,163,147	-				-1.0
3,163,147	-				+0.7
3,163,173	+				+0.4
3,163,173	+				+0.3
3,163,173	+				+0.2
3,163,233	+				-0.6
3,163,281	+				-1.8
3,163,281	+				-0.6
3,163,281	+				-0.4
3,163,457	-				-0.4
3,163,472	+				-0.9
3,163,497	+				+0.6
3,163,497	+				-0.2
3,163,497	+				+0.2
3,163,498	-				+0.1
3,163,498	-				-1.3
3,163,498	-				+1.3
3,163,498	-				+1.1
3,163,671	+				-1.3
3,163,671	+				+0.3
3,163,672	-				-1.4
3,163,778	+		AO356_13935	0.16	+1.2
3,163,851	+		AO356_13935	0.19	-0.5
3,164,010	+		AO356_13935	0.28	+1.5
3,164,010	+		AO356_13935	0.28	-1.3
3,164,011	-		AO356_13935	0.28	-0.3
3,164,030	-		AO356_13935	0.29	-1.3
3,164,030	-		AO356_13935	0.29	-2.4
3,164,065	-		AO356_13935	0.31	+0.7
3,164,070	+		AO356_13935	0.31	+0.2
3,164,070	+		AO356_13935	0.31	+0.0
3,164,070	+		AO356_13935	0.31	+2.2
3,164,071	-		AO356_13935	0.31	-1.5
3,164,110	-		AO356_13935	0.33	-1.8
3,164,112	+		AO356_13935	0.33	+0.5
3,164,112	+		AO356_13935	0.33	+0.5
3,164,112	+		AO356_13935	0.33	-1.8
3,164,112	+		AO356_13935	0.33	+0.1
3,164,113	-		AO356_13935	0.33	-0.7
3,164,191	-		AO356_13935	0.38	+0.4