Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12950

Experiment: 1-ethyl-3-methylimidazolium chloride 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 200 mM
2,946,888	+		AO356_12945	0.37	+0.2
2,946,903	+		AO356_12945	0.39	-1.4
2,946,903	+		AO356_12945	0.39	-1.5
2,946,904	-		AO356_12945	0.39	-2.0
2,947,200	+		AO356_12945	0.70	-1.3
2,947,201	-		AO356_12945	0.70	-0.8
2,947,201	-		AO356_12945	0.70	-0.3
2,947,201	-		AO356_12945	0.70	-0.8
2,947,201	-		AO356_12945	0.70	-0.1
2,947,231	-		AO356_12945	0.73	-1.5
2,947,380	+		AO356_12945	0.88	-2.2
2,947,407	+				-2.0
2,947,407	+				-1.6
2,947,407	+				+1.5
2,947,407	+				-1.3
2,947,407	+				-0.2
2,947,407	+				-0.1
2,947,407	+				+0.0
2,947,408	-				-1.2
2,947,408	-				-3.3
2,947,408	-				-0.7
2,947,408	-				-2.4
2,947,408	-				-0.0
2,947,408	-				-1.1
2,947,408	-				-0.5
2,947,408	-				-0.8
2,947,408	-				-1.1
2,947,468	+				+0.1
2,947,468	+				-1.6
2,947,468	+				+0.4
2,947,468	+				-2.3
2,947,468	+				-2.0
2,947,468	+				-0.8
2,947,468	+				-0.1
2,947,468	+				-0.1
2,947,468	+				-0.8
2,947,468	+				-0.7
2,947,468	+				-0.5
2,947,468	+				-2.3
2,947,469	-				-0.4
2,947,469	-				-0.3
2,947,469	-				+0.7
2,947,469	-				-0.7
2,947,469	-				-1.3
2,947,469	-				-2.2
2,947,469	-				-0.7
2,947,476	+				-0.5
2,947,477	-				-0.3
2,947,477	-				+0.5
2,947,477	-				-2.4
2,947,534	-				-1.5
2,947,595	+				+0.1
2,947,595	+				+0.1
2,947,595	+				+1.6
2,947,595	+				+1.1
2,947,595	+				+0.9
2,947,595	+				+0.8
2,947,595	+				+0.5
2,947,595	+				-1.0
2,947,595	+				+1.5
2,947,595	+				+0.9
2,947,596	-				-1.4
2,947,596	-				+1.1
2,947,596	-				-2.7
2,947,596	-				-0.2
2,947,596	-				+0.0
2,947,654	+				-0.3
2,947,654	+				+2.0
2,947,654	+				-0.2
2,947,655	-				+1.3
2,947,655	-				-1.2
2,947,655	-				-0.0
2,947,655	-				+1.0
2,947,655	-				+0.0
2,947,656	+				-0.9
2,947,656	+				+0.1
2,947,656	+				+0.9
2,947,656	+				-0.3
2,947,656	+				+1.1
2,947,657	-				+0.1
2,947,657	-				+0.8
2,947,657	-				+0.4
2,947,657	-				+0.7
2,947,657	-				+1.4
2,947,657	-				+2.6
2,947,657	-				-0.3
2,947,657	-				-1.2
2,947,664	+				-1.2
2,947,665	-				-0.5
2,947,710	+				-1.0
2,947,710	+				+0.7
2,947,710	+				+0.4
2,947,710	+				-0.6
2,947,710	+				-0.8
2,947,711	-				+0.7
2,947,711	-				-0.4
2,947,711	-				-2.5
2,947,711	-				-1.0
2,947,714	+				-0.7
2,947,715	-				-0.5
2,947,715	-				+0.6
2,947,732	+				+1.1
2,947,732	+				+0.8
2,947,732	+				-0.7
2,947,732	+				+2.5
2,947,732	+				-1.1
2,947,732	+				-0.4
2,947,732	+				+2.0
2,947,733	-				+0.5
2,947,733	-				-0.0
2,947,733	-				+0.1
2,947,749	+				+0.2
2,947,840	+				-2.2
2,947,840	+				-0.6
2,947,840	+				+1.8
2,947,841	-				-2.5
2,947,841	-				+0.3
2,947,853	+				-0.0
2,947,854	-				+0.6
2,947,854	-				+0.9
2,948,027	+		AO356_12950	0.31	+1.8
2,948,028	-		AO356_12950	0.32	+0.9
2,948,042	+		AO356_12950	0.34	+0.7
2,948,042	+		AO356_12950	0.34	-1.0
2,948,043	-		AO356_12950	0.34	+0.4
2,948,043	-		AO356_12950	0.34	-3.2
2,948,043	-		AO356_12950	0.34	+0.7
2,948,043	-		AO356_12950	0.34	+1.3
2,948,043	-		AO356_12950	0.34	-2.1
2,948,132	+		AO356_12950	0.47	+0.4
2,948,204	+		AO356_12950	0.58	-0.7
2,948,291	+		AO356_12950	0.71	+0.8
2,948,291	+		AO356_12950	0.71	+0.2
2,948,292	-		AO356_12950	0.71	+0.6
2,948,292	-		AO356_12950	0.71	+0.6
2,948,369	+		AO356_12950	0.83	+0.2
2,948,369	+		AO356_12950	0.83	+2.0
2,948,491	+				+1.4
2,948,594	+				+2.2
2,948,594	+				+1.4
2,948,594	+				+0.7
2,948,595	-				-2.8
2,948,665	-		AO356_12955	0.15	-0.5
2,948,726	+		AO356_12955	0.20	-0.8
2,948,727	-		AO356_12955	0.20	-1.3
2,948,727	-		AO356_12955	0.20	+0.3
2,948,727	-		AO356_12955	0.20	-2.0
2,948,795	+		AO356_12955	0.25	-1.2
2,948,795	+		AO356_12955	0.25	-0.4
2,948,795	+		AO356_12955	0.25	+0.8
2,948,796	-		AO356_12955	0.25	-0.4
2,948,796	-		AO356_12955	0.25	+2.4
2,948,918	+		AO356_12955	0.34	+1.3
2,948,918	+		AO356_12955	0.34	-0.2
2,948,919	-		AO356_12955	0.34	-0.5
2,948,919	-		AO356_12955	0.34	-0.1
2,948,919	-		AO356_12955	0.34	-0.8
2,948,919	-		AO356_12955	0.34	+0.2
2,948,928	-		AO356_12955	0.35	+0.6
2,948,928	-		AO356_12955	0.35	+1.7
2,948,975	+		AO356_12955	0.38	+1.4
2,948,975	+		AO356_12955	0.38	+0.6
2,948,975	+		AO356_12955	0.38	-1.0
2,948,975	+		AO356_12955	0.38	-0.7
2,948,976	-		AO356_12955	0.38	-1.1
2,948,976	-		AO356_12955	0.38	-0.6
2,948,976	-		AO356_12955	0.38	+0.7
2,949,014	+		AO356_12955	0.41	+0.7
2,949,014	+		AO356_12955	0.41	+0.3
2,949,014	+		AO356_12955	0.41	-1.5
2,949,015	-		AO356_12955	0.41	-2.1
2,949,015	-		AO356_12955	0.41	-0.2
2,949,015	-		AO356_12955	0.41	+1.2
2,949,041	+		AO356_12955	0.43	-1.7
2,949,041	+		AO356_12955	0.43	+0.6
2,949,041	+		AO356_12955	0.43	-0.2
2,949,042	-		AO356_12955	0.43	-1.4
2,949,042	-		AO356_12955	0.43	+0.4
2,949,042	-		AO356_12955	0.43	-0.4
2,949,042	-		AO356_12955	0.43	+1.6
2,949,068	+		AO356_12955	0.45	-1.3
2,949,068	+		AO356_12955	0.45	+1.1
2,949,068	+		AO356_12955	0.45	+1.4
2,949,068	+		AO356_12955	0.45	-1.7
2,949,068	+		AO356_12955	0.45	-1.5
2,949,068	+		AO356_12955	0.45	-1.9
2,949,068	+		AO356_12955	0.45	+0.4
2,949,068	+		AO356_12955	0.45	-1.4
2,949,069	-		AO356_12955	0.45	-0.3
2,949,069	-		AO356_12955	0.45	-0.8
2,949,069	-		AO356_12955	0.45	-0.2
2,949,069	-		AO356_12955	0.45	+0.4
2,949,069	-		AO356_12955	0.45	+2.9
2,949,069	-		AO356_12955	0.45	+0.4
2,949,143	+		AO356_12955	0.51	-1.5
2,949,143	+		AO356_12955	0.51	+0.4
2,949,239	+		AO356_12955	0.58	+0.7
2,949,239	+		AO356_12955	0.58	-0.3
2,949,239	+		AO356_12955	0.58	-0.3
2,949,239	+		AO356_12955	0.58	-0.3
2,949,239	+		AO356_12955	0.58	+0.9
2,949,239	+		AO356_12955	0.58	+1.5
2,949,239	+		AO356_12955	0.58	-0.3
2,949,239	+		AO356_12955	0.58	-1.5
2,949,239	+		AO356_12955	0.58	-0.8
2,949,239	+		AO356_12955	0.58	+2.2
2,949,239	+		AO356_12955	0.58	+1.6
2,949,239	+		AO356_12955	0.58	+0.5
2,949,239	+		AO356_12955	0.58	-0.9
2,949,239	+		AO356_12955	0.58	-2.2
2,949,239	+		AO356_12955	0.58	-3.0
2,949,240	-		AO356_12955	0.58	+0.0
2,949,240	-		AO356_12955	0.58	+1.2
2,949,240	-		AO356_12955	0.58	-0.7
2,949,240	-		AO356_12955	0.58	+0.5
2,949,240	-		AO356_12955	0.58	-1.6
2,949,240	-		AO356_12955	0.58	+0.7
2,949,240	-		AO356_12955	0.58	+1.4
2,949,240	-		AO356_12955	0.58	-0.5
2,949,240	-		AO356_12955	0.58	-0.7
2,949,240	-		AO356_12955	0.58	-2.2
2,949,240	-		AO356_12955	0.58	-0.3
2,949,240	-		AO356_12955	0.58	-0.2
2,949,240	-		AO356_12955	0.58	-1.8
2,949,240	-		AO356_12955	0.58	-1.3
2,949,240	-		AO356_12955	0.58	-0.6
2,949,240	-		AO356_12955	0.58	-0.8
2,949,240	-		AO356_12955	0.58	-0.3
2,949,240	-		AO356_12955	0.58	+0.4