Strain Fitness in Shewanella loihica PV-4 around Shew_0970
Experiment: Bacitracin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,113,335 | + | Shew_0969 | 0.39 | -0.0 | |
1,113,509 | + | Shew_0969 | 0.52 | -0.1 | |
1,113,762 | - | Shew_0969 | 0.71 | -0.2 | |
1,113,793 | - | Shew_0969 | 0.74 | -0.6 | |
1,113,795 | + | Shew_0969 | 0.74 | +0.4 | |
1,114,127 | - | +0.2 | |||
1,114,336 | + | -4.2 | |||
1,114,516 | - | Shew_0970 | 0.36 | -4.9 | |
1,114,614 | - | Shew_0970 | 0.54 | -4.7 | |
1,115,365 | + | -0.1 | |||
1,115,615 | - | Shew_0971 | 0.40 | -1.1 | |
1,115,789 | + | Shew_0971 | 0.63 | -0.4 | |
1,115,811 | + | Shew_0971 | 0.66 | +0.0 | |
1,115,858 | + | Shew_0971 | 0.72 | -1.1 |
Or see this region's nucleotide sequence