Strain Fitness in Shewanella loihica PV-4 around Shew_0134

Experiment: Bacitracin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.125 mg/ml
142,747	-		Shew_0133	0.59	-0.2
142,766	-		Shew_0133	0.60	-0.1
142,780	-		Shew_0133	0.61	-0.2
142,859	+		Shew_0133	0.65	+3.2
142,867	-		Shew_0133	0.66	-0.8
142,944	-		Shew_0133	0.70	+1.6
142,944	-		Shew_0133	0.70	+0.2
142,944	-		Shew_0133	0.70	-0.1
142,982	-		Shew_0133	0.72	+0.1
142,996	+		Shew_0133	0.73	+0.2
143,086	-		Shew_0133	0.77	+0.2
143,105	+		Shew_0133	0.78	+0.1
143,154	-		Shew_0133	0.81	-0.2
143,350	-				-0.3
143,382	-				+0.2
143,386	+				+0.7
143,601	-				-0.3
143,635	-				-0.0
143,704	+		Shew_0134	0.13	-0.0
143,804	-		Shew_0134	0.22	-0.0
143,973	+		Shew_0134	0.37	-0.0
143,981	-		Shew_0134	0.38	+2.3
143,981	-		Shew_0134	0.38	+0.3
143,981	-		Shew_0134	0.38	+0.4
143,981	-		Shew_0134	0.38	-0.1
143,986	-		Shew_0134	0.39	+0.3
144,048	+		Shew_0134	0.44	-0.2
144,053	+		Shew_0134	0.45	-0.1
144,255	-		Shew_0134	0.63	+0.2
144,265	+		Shew_0134	0.63	+0.6
144,619	+				-0.4
144,627	-				-0.0
144,684	-				+0.3
144,963	+		Shew_0135	0.28	+0.1
144,971	-		Shew_0135	0.29	-0.4
144,971	-		Shew_0135	0.29	-0.1
145,396	+		Shew_0135	0.69	-0.4
145,520	+		Shew_0135	0.81	-0.0
145,644	-				+3.6